RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FAAHO00519 579 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 AP3D1O14617 1153 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 TOXO94900 526 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 IL18BPO95998 194 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 PLGP00747 810 aaPredicted RBP12.36□□□□□ -0.43
USF1-205ENST00000473969 IL11P20809 199 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 PRDX6P30041 224 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 SLC1A3P43003 542 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 POLR2HP52434 150 aaKnown RBP12.36□□□□□ -0.43
USF1-205ENST00000473969 NCALDP61601 193 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 ADRM1Q16186 407 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 VMACQ2NL98 169 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 RABL3Q5HYI8 236 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 WBP2NLQ6ICG8 309 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 DHRS4L2Q6PKH6 230 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 NET1Q7Z628 596 aaPredicted RBP12.36□□□□□ -0.43
USF1-205ENST00000473969 PIGWQ7Z7B1 504 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 ZZZ3Q8IYH5 903 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 C10orf111Q8N326 155 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 CLIP4Q8N3C7 705 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 CADM2Q8N3J6 435 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 FIG4Q92562 907 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 SLC35B4Q969S0 331 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
USF1-205ENST00000473969 ZNF845Q96IR2 970 aaPredicted RBP12.36□□□□□ -0.43
USF1-205ENST00000473969 OR5B2Q96R09 309 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 HOPXQ9BPY8 73 aaPredicted RBP12.36□□□□□ -0.43
USF1-205ENST00000473969 SFXN3Q9BWM7 321 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 MYLK2Q9H1R3 596 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 CTPS2Q9NRF8 586 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 CHRNA9Q9UGM1 479 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 DOPEY2Q9Y3R5 2298 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 EEF1E1-BLOC1S5C9J1V9 151 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 M0QX08 132 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 NDUFAB1O14561 156 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
USF1-205ENST00000473969 NTN1O95631 604 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 TGM6O95932 706 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 FAM107AO95990 144 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 IFNA14P01570 189 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 CRHP06850 196 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 CCNA2P20248 432 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 CXCR1P25024 350 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 PCGF2P35227 344 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 NUDT2P50583 147 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 MAP2K6P52564 334 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 AGFG1P52594 562 aaKnown RBP12.35□□□□□ -0.43
USF1-205ENST00000473969 ZNF136P52737 540 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 CTBP2P56545 445 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 CSNK2A1P68400 391 aaPredicted RBP12.35□□□□□ -0.43
USF1-205ENST00000473969 PLXDC2Q6UX71 529 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 PTOV1Q86YD1 416 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 GCNT2Q8N0V5 402 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 CNEP1R1Q8N9A8 125 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 NAXEQ8NCW5 288 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 FNDC9Q8TBE3 224 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 RASSF5Q8WWW0 418 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 DDIT4LQ96D03 193 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 ZHX1-C8orf76Q96EF9 292 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 SELENONQ9NZV5 590 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 DOPEY1Q5JWR5 2465 aa12.35□□□□□ -0.43
USF1-205ENST00000473969 TMED7-TICAM2A0A0A6YYA0 188 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 FXYD1O00168 92 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 SULT2B1O00204 365 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 EFNA2O43921 213 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 COX6B1P14854 86 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 COL8A1P27658 744 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 TACR3P29371 465 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 CLK1P49759 484 aaKnown RBP12.34□□□□□ -0.43
USF1-205ENST00000473969 DLX5P56178 289 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 RAC3P60763 192 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 PLAURQ03405 335 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 CDSNQ15517 529 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 CTU2Q2VPK5 515 aaKnown RBP12.34□□□□□ -0.43
USF1-205ENST00000473969 SYT14P1Q58G82 188 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 TREML1Q86YW5 311 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 LIX1LQ8IVB5 337 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 ANKS4BQ8N8V4 417 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 OR2T12Q8NG77 320 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 ADGRG7Q96K78 797 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 PIGMQ9H3S5 423 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 GLRX2Q9NS18 164 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 OSGIN1Q9UJX0 560 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 ADAM21Q9UKJ8 722 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 TMED7Q9Y3B3 224 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 EMC9Q9Y3B6 208 aa12.34□□□□□ -0.43
USF1-205ENST00000473969 PHF3Q92576 2039 aaKnown RBP12.33□□□□□ -0.43
USF1-205ENST00000473969 MED12Q93074 2177 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 A0A1W2PNR3 127 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 GSTA4O15217 222 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 ZNF208O43345 1280 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 FRS3O43559 492 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 SMNDC1O75940 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
USF1-205ENST00000473969 MFN2O95140 757 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 ENPP1P22413 925 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 SHC1P29353 583 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 ACAA2P42765 397 aaKnown RBP12.33□□□□□ -0.44
USF1-205ENST00000473969 CPA2P48052 419 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 ASCL1P50553 236 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms