RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PDSS1Q5T2R2 415 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 GRINAQ7Z429 371 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 GDF7Q7Z4P5 450 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 COMTD1Q86VU5 262 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 PTOV1Q86YD1 416 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 ROBO4Q8WZ75 1007 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 SLC39A3Q9BRY0 314 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 PRRG4Q9BZD6 226 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 PIGMQ9H3S5 423 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 CORO2BQ9UQ03 480 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 TEX15Q9BXT5 2789 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 CFAP73A6NFT4 308 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 C5orf58C9J3I9 102 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 FXYD1O00168 92 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 FAAHO00519 579 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SMNDC1O75940 238 aaKnown RBP eCLIP16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SYNGR4O95473 234 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 CGAP01215 116 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 PRG2P13727 222 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SLC7A1P30825 629 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 ACAA2P42765 397 aaKnown RBP16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SEC24CP53992 1094 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SCARB2Q14108 478 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 LARS2Q15031 903 aaKnown RBP16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SYT14P1Q58G82 188 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SNX32Q86XE0 403 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 ADGRG3Q86Y34 549 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 RNF128Q8TEB7 428 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 OR5B2Q96R09 309 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 SPATA9Q9BWV2 254 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 RBM24Q9BX46 236 aaKnown RBP16.93■□□□□ 0.3
PTCD3-210ENST00000473829 OPN3Q9H1Y3 402 aaPredicted RBP16.93■□□□□ 0.3
PTCD3-210ENST00000473829 TMEM38AQ9H6F2 299 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 GALNT8Q9NY28 637 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 ARMCX1Q9P291 453 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 CHRNA9Q9UGM1 479 aa16.93■□□□□ 0.3
PTCD3-210ENST00000473829 ANKHD1Q8IWZ3 2542 aaKnown RBP16.92■□□□□ 0.3
PTCD3-210ENST00000473829 IGHV3-15A0A0B4J1V0 119 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 A8MXE2 369 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 FRS3O43559 492 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 SS18L1O75177 396 aaPredicted RBP16.92■□□□□ 0.3
PTCD3-210ENST00000473829 APOBEC1P41238 236 aaKnown RBP16.92■□□□□ 0.3
PTCD3-210ENST00000473829 GYS2P54840 703 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 TRMT5Q32P41 509 aaKnown RBP16.92■□□□□ 0.3
PTCD3-210ENST00000473829 ZNF311Q5JNZ3 666 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 REP15Q6BDI9 236 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 REEP3Q6NUK4 255 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 FAM214BQ7L5A3 538 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 SERPINA11Q86U17 422 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 ABHD3Q8WU67 409 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 CPNE4Q96A23 557 aaPredicted RBP16.92■□□□□ 0.3
PTCD3-210ENST00000473829 DNAJA3Q96EY1 480 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 C14orf79Q96F83 325 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 ARL5BQ96KC2 179 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 OR11A1Q9GZK7 315 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 OSGIN1Q9UJX0 560 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 IFT52Q9Y366 437 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 LRBAP50851 2863 aa16.92■□□□□ 0.3
PTCD3-210ENST00000473829 TMED7-TICAM2A0A0A6YYA0 188 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 MSTNO14793 375 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 ETS2P15036 469 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 CCNA2P20248 432 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 ENPP1P22413 925 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 TACR3P29371 465 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 AQP1P29972 269 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 CPA2P48052 419 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 EEF1A1P5Q5VTE0 462 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 ZNF474Q6S9Z5 364 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-210ENST00000473829 ZNF440Q8IYI8 595 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 SLC25A43Q8WUT9 341 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-210ENST00000473829 GMPPAQ96IJ6 420 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-210ENST00000473829 KAT8Q9H7Z6 458 aaKnown RBP16.91■□□□□ 0.3
PTCD3-210ENST00000473829 SERINC1Q9NRX5 453 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 CRIM1Q9NZV1 1036 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 FOXD3Q9UJU5 478 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-210ENST00000473829 ZNF232Q9UNY5 417 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 TMED7Q9Y3B3 224 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 CAPN7Q9Y6W3 813 aa16.91■□□□□ 0.3
PTCD3-210ENST00000473829 LOC100653049A0A140TA62 436 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 TMEM72A0PK05 275 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 MRASO14807 208 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 SMAD9O15198 467 aaKnown RBP16.9■□□□□ 0.3
PTCD3-210ENST00000473829 TPST1O60507 370 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 KRT34O76011 436 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 PLGP00747 810 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-210ENST00000473829 AGTR1P30556 359 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 SSTR2P30874 369 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 CPOXP36551 454 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 SLC1A3P43003 542 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 DIO1P49895 249 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 POLR2HP52434 150 aaKnown RBP16.9■□□□□ 0.3
PTCD3-210ENST00000473829 KRTAP10-9P60411 292 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 RAC3P60763 192 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 HOXC5Q00444 222 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 TLE4Q04727 773 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 MYBPHQ13203 477 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 CYP51A1Q16850 503 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 GLIPR1L2Q4G1C9 344 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 RABL3Q5HYI8 236 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 FCRLAQ7L513 359 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms