RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ZNF251Q9BRH9 671 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SLC35A5Q9BS91 424 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 TMED9Q9BVK6 235 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 NRSN2Q9GZP1 204 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 MAGEH1Q9H213 219 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 WDR26Q9H7D7 661 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 BRF2Q9HAW0 419 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 OR6C2Q9NZP2 312 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 PIPOXQ9P0Z9 390 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 LSM7Q9UK45 103 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 CAMK2AQ9UQM7 478 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 DTX4Q9Y2E6 619 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 CHST2Q9Y4C5 530 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 MYO18BQ8IUG5 2567 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 A0A1W2PQH9 124 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 TCRBV16S1A1N1A0A5B0 115 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 LINC00587B1AMM8 73 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 ANKRD66B4E2M5 251 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 NPC1O15118 1278 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 BRINP1O60477 761 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 PRAMEF2O60811 474 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 RNGTTO60942 597 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 HPXP02790 462 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 WNT1P04628 370 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SERPIND1P05546 499 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 S100A9P06702 114 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 EPHX1P07099 455 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 C8GP07360 202 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 CD27P26842 260 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 OR1E1P30953 314 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 PRKAR1BP31321 381 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 THBS2P35442 1172 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 ACVRL1P37023 503 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SLC6A12P48065 614 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 GIPRP48546 466 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 RPIAP49247 311 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SRP9P49458 86 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 GPR143P51810 404 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 PSMD4P55036 377 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 MC2RQ01718 297 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 NFATC2Q13469 925 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 KLF9Q13886 244 aaPredicted RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 FGL2Q14314 439 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 GINS1Q14691 196 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 ZSWIM7Q19AV6 140 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 COX20Q5RI15 118 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 HES3Q5TGS1 186 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 FBXL22Q6P050 247 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 GSG1LQ6UXU4 331 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 LINGO4Q6UY18 593 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 BCDIN3DQ7Z5W3 292 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 SLC9B2Q86UD5 537 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SAMD12Q8N8I0 201 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 DMBX1Q8NFW5 382 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 GNPDA2Q8TDQ7 276 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 APOBEC4Q8WW27 367 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 CNOT9Q92600 299 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 ABHD1Q96SE0 405 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 FUZQ9BT04 418 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 CDCP1Q9H5V8 836 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 DDX31Q9H8H2 851 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 DNAJC11Q9NVH1 559 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 GPATCH2Q9NW75 528 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 IL17CQ9P0M4 197 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 PTGFRNQ9P2B2 879 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 TINAGQ9UJW2 476 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 SCML2Q9UQR0 700 aa9.37□□□□□ -0.91
APTX-216ENST00000472896 EXOGQ9Y2C4 368 aaKnown RBP9.37□□□□□ -0.91
APTX-216ENST00000472896 COL6A6A6NMZ7 2263 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 A0A1W2PRB8 838 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 ANKRD61A6NGH8 418 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 FFAR1O14842 300 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 SLC16A5O15375 505 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 KDM4BO94953 1096 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 SEMA4FO95754 770 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 RECKO95980 971 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 IGHV4-34P06331 123 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 ATP5A1P25705 553 aaKnown RBP9.36□□□□□ -0.91
APTX-216ENST00000472896 STAT5AP42229 794 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 NR0B1P51843 470 aaKnown RBP9.36□□□□□ -0.91
APTX-216ENST00000472896 AP3S2P59780 193 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 PSMA6P60900 246 aaKnown RBP9.36□□□□□ -0.91
APTX-216ENST00000472896 STX4Q12846 297 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 ANGPTL8Q6UXH0 198 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 WDR53Q7Z5U6 358 aaPredicted RBP9.36□□□□□ -0.91
APTX-216ENST00000472896 SERPINA9Q86WD7 417 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 EID2Q8N6I1 236 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 BEST4Q8NFU0 473 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 OR6K3Q8NGY3 331 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 HAVCR2Q8TDQ0 301 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 SAP25Q8TEE9 199 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
APTX-216ENST00000472896 UTP23Q9BRU9 249 aaKnown RBP9.36□□□□□ -0.91
APTX-216ENST00000472896 ABCG8Q9H221 673 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 FBXO44Q9H4M3 255 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 PLEKHA1Q9HB21 404 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms