RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 RFX3P48380 749 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 PRPS1P60891 318 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ACTA2P62736 377 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ACTG2P63267 376 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 HSF2Q03933 536 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CRYZQ08257 329 aaKnown RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 FZD5Q13467 585 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TDGQ13569 410 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 IL10RAQ13651 578 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 GGTLC2Q14390 218 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CT45A2Q5DJT8 189 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 HBMQ6B0K9 141 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 NPSR1Q6W5P4 371 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ZNF517Q6ZMY9 492 aaPredicted RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 TMEM91Q6ZNR0 172 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 Q6ZS52 159 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 NUP54Q7Z3B4 507 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 NRARPQ7Z6K4 114 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 SFTPA2Q8IWL1 248 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TDHQ8IZJ6 230 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TMEM99Q8N816 258 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 BCORP1Q8N888 145 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ZNF615Q8N8J6 731 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ZFP41Q8N8Y5 198 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 SYT14Q8NB59 555 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 C19orf18Q8NEA5 215 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 OR10H4Q8NGA5 316 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 OR2T27Q8NH04 317 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 OR51A7Q8NH64 312 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 HAVCR2Q8TDQ0 301 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 LMX1AQ8TE12 382 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 SMPDL3BQ92485 455 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 PHYHIPQ92561 330 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ITFG2Q969R8 447 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 SLC46A1Q96NT5 459 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 DEPDC7Q96QD5 511 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 UBL7Q96S82 380 aaPredicted RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 ENKD1Q9H0I2 346 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 OR51V1Q9H2C8 321 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 PPP1R3EQ9H7J1 279 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 LMAN1LQ9HAT1 526 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ADGRL4Q9HBW9 690 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 MCCC2Q9HCC0 563 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 EXOSC3Q9NQT5 275 aaKnown RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 COMMD3Q9UBI1 195 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CHRNA9Q9UGM1 479 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 SLC6A5Q9Y345 797 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ZNF337Q9Y3M9 751 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 FANCMQ8IYD8 2048 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TRAV27A0A087WT01 109 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 C19orf67A6NJJ6 358 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 LMO7DNF2Z398 122 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TMEM127O75204 238 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 RFPL3O75679 317 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CCNKO75909 580 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 IFNA16P05015 189 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 PPICP45877 212 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 HTR3AP46098 478 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 FNTBP49356 437 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 SLC16A1P53985 500 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 NRG3P56975 720 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 DCAF7P61962 342 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CRMP1Q14194 572 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 KLHL26Q53HC5 615 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 HACD4Q5VWC8 232 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TRIQKQ629K1 86 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 VASNQ6EMK4 673 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 WBP2NLQ6ICG8 309 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 VASH1Q7L8A9 365 aaPredicted RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 RDH10Q8IZV5 341 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 OR51Q1Q8NH59 317 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 C16orf52Q8NHV5 167 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 LIPHQ8WWY8 451 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TP53INP1Q96A56 240 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ZC3HAV1LQ96H79 300 aaKnown RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 SPACA7Q96KW9 195 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 PTCHD1Q96NR3 888 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ERMAPQ96PL5 475 aaPredicted RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 OR1F2PQ96R84 312 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TTYH2Q9BSA4 534 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 TMEM43Q9BTV4 400 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 MFRPQ9BY79 579 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.78□□□□□ -0.84
APLF-204ENST00000471727 MED20Q9H944 212 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ISG20L2Q9H9L3 353 aaKnown RBP9.78□□□□□ -0.84
APLF-204ENST00000471727 C12orf10Q9HB07 376 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CAPN10Q9HC96 672 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 UBQLN4Q9NRR5 601 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 SOHLH2Q9NX45 425 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 GMEB2Q9UKD1 530 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ERVK-19Q9WJR5 959 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 CLDN16Q9Y5I7 305 aa9.78□□□□□ -0.84
APLF-204ENST00000471727 ANKRD61A6NGH8 418 aa9.77□□□□□ -0.85
APLF-204ENST00000471727 HMX3A6NHT5 357 aa9.77□□□□□ -0.85
APLF-204ENST00000471727 CD8B2A6NJW9 211 aa9.77□□□□□ -0.85
APLF-204ENST00000471727 TMEM150CB9EJG8 249 aa9.77□□□□□ -0.85
APLF-204ENST00000471727 TGFBR3LH3BV60 316 aa9.77□□□□□ -0.85
APLF-204ENST00000471727 IMPA2O14732 288 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms