RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MKRN2OSH3BPM6 223 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 HAX1O00165 279 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 CDC42EP2O14613 210 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 HS6ST1O60243 411 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 PIP5K1CO60331 668 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 CDC40O60508 579 aaKnown RBP eCLIP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 PTP4A3O75365 173 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 CIB2O75838 187 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ATP6V1G2O95670 118 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 IFNW1P05000 195 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 THRBP10828 461 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 MAKP20794 623 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 TACR3P29371 465 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 MAGEA5P43359 124 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 DSCR4P56555 118 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 RGS8P57771 180 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 PPP2R2BQ00005 443 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 CHRNB3Q05901 458 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 RCN1Q15293 331 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 GLYR1Q49A26 553 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 NHSL2Q5HYW2 709 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 WIPI1Q5MNZ9 446 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ZFP1Q6P2D0 407 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 FAHD1Q6P587 224 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 DEF8Q6ZN54 512 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ASB18Q6ZVZ8 466 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 FKBP9P1Q75LS8 142 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 YRDCQ86U90 279 aaKnown RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 PACS2Q86VP3 889 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 MEX3DQ86XN8 651 aaKnown RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF440Q8IYI8 595 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 OR1J4Q8NGS1 313 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 PFN4Q8NHR9 129 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 LIPHQ8WWY8 451 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ST8SIA1Q92185 356 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 LRGUKQ96M69 825 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF559Q9BR84 538 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 TRIM15Q9C019 465 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 POLR2J2Q9GZM3 115 aaKnown RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 POLR2J3Q9H1A7 115 aaKnown RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 SEMA6AQ9H2E6 1030 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 COQ10BQ9H8M1 238 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 C12orf10Q9HB07 376 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 TAS2R10Q9NYW0 307 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 PPP4R1LQ9P1A2 415 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 REV1Q9UBZ9 1251 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ING1Q9UK53 422 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 SLC7A7Q9UM01 511 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 KLF13Q9Y2Y9 288 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF337Q9Y3M9 751 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 TESMINQ9Y4I5 508 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 FAM166BA8MTA8 275 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 LRRN3E7EW58 273 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 PDLIM1O00151 329 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 GTPBP1O00178 669 aaKnown RBP8.91□□□□□ -0.98
SF3A1-207ENST00000471342 HNRNPRO43390 633 aaKnown RBP8.91□□□□□ -0.98
SF3A1-207ENST00000471342 CHP2O43745 196 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 CST1P01037 141 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 GASTP01350 101 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 BGLAPP02818 100 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 CD46P15529 392 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 FUT1P19526 365 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 PTNP21246 168 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 DPP4P27487 766 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 ADH6P28332 368 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 SLC6A8P48029 635 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 GSSP48637 474 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 LHX2P50458 406 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 DAPP51397 102 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 CTBP2P56545 445 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 CLDN18P56856 261 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 PPIAP62937 165 aaKnown RBP8.91□□□□□ -0.98
SF3A1-207ENST00000471342 LY6DQ14210 128 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 EXOC3L2Q2M3D2 409 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 EMC4Q5J8M3 183 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 SWT1Q5T5J6 900 aaKnown RBP8.91□□□□□ -0.98
SF3A1-207ENST00000471342 OGFRL1Q5TC84 451 aaPredicted RBP8.91□□□□□ -0.98
SF3A1-207ENST00000471342 WBP2NLQ6ICG8 309 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 PGBD2Q6P3X8 592 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 GRINAQ7Z429 371 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 ADGRE4PQ86SQ3 457 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 KIF18BQ86Y91 864 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 ZADH2Q8N4Q0 377 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 LRRC75AQ8NAA5 344 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 OR9Q2Q8NGE9 314 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 LZICQ8WZA0 190 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 PNPLA2Q96AD5 504 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 KTI12Q96EK9 354 aaPredicted RBP8.91□□□□□ -0.98
SF3A1-207ENST00000471342 WBP1Q96G27 269 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 MRGPRX4Q96LA9 322 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF597Q96LX8 424 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 EPYCQ99645 322 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 NIPSNAP1Q9BPW8 284 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 TRIM2Q9C040 744 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 OR11A1Q9GZK7 315 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 GABARAPL1Q9H0R8 117 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 SLC6A15Q9H2J7 730 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 ANKRD19PQ9H560 264 aa8.91□□□□□ -0.98
SF3A1-207ENST00000471342 QPCTLQ9NXS2 382 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms