RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 HOXB9P17482 250 aaPredicted RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 APOBEC1P41238 236 aaKnown RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 GUCY1A3Q02108 690 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 FAM27E3Q08E93 113 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 LARS2Q15031 903 aaKnown RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 GUSBP1Q15486 140 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 SYT14P1Q58G82 188 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 LRIF1Q5T3J3 769 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 GCNT6Q5T4J0 391 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 ZNF836Q6ZNA1 936 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 FCRLAQ7L513 359 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 GRINAQ7Z429 371 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 CCDC106Q9BWC9 280 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 C12orf49Q9H741 205 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 COQ10BQ9H8M1 238 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 A4GALTQ9NPC4 353 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 MED4Q9NPJ6 270 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 GLRX2Q9NS18 164 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 VAPAQ9P0L0 249 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 CHRNA9Q9UGM1 479 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 LEF1Q9UJU2 399 aaPredicted RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 ZNF232Q9UNY5 417 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 ZNF443Q9Y2A4 671 aaPredicted RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 NDUFAF1Q9Y375 327 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 SPIN1Q9Y657 262 aaPredicted RBP11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 MYO9AB2RTY4 2548 aa11.28□□□□□ -0.6
PPP1R3F-204ENST00000471261 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 SH3D21A4FU49 640 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 CDHR4A6H8M9 788 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 A6NNC1 897 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 EVPLLA8MZ36 301 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 SULT2B1O00204 365 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 HNRNPCL1O60812 293 aaKnown RBP11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 CTAG2O75638 210 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 GKN3PP0CG01 181 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 CD8BP10966 210 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 EPXP11678 715 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 ENPP1P22413 925 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 PPIBP23284 216 aaKnown RBP11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 CD79BP40259 229 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 RAC3P60763 192 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 RNPS1Q15287 305 aaKnown RBP11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 TMEM201Q5SNT2 666 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 OR6K3Q8NGY3 331 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 NFKBIDQ8NI38 313 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 RNF128Q8TEB7 428 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 SLC25A43Q8WUT9 341 aaPredicted RBP11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 POLDIP3Q9BY77 421 aaKnown RBP11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 KLHL4Q9C0H6 718 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 OR11A1Q9GZK7 315 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 CLEC4MQ9H2X3 399 aaPredicted RBP11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 ZNF385DQ9H6B1 395 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 ARMC7Q9H6L4 198 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 ELOVL5Q9NYP7 299 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 NDRG3Q9UGV2 375 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 ITGB1BP2Q9UKP3 347 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 CORO2BQ9UQ03 480 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 DSPPQ9NZW4 1301 aa11.27□□□□□ -0.61
PPP1R3F-204ENST00000471261 PDZD2O15018 2839 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 CASKO14936 926 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 PRKD3O94806 890 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 TACR3P29371 465 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 AGTR1P30556 359 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 UGT2B10P36537 528 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 HTR3AP46098 478 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 DIO1P49895 249 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 POLR2HP52434 150 aaKnown RBP11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 ARFIP2P53365 341 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 COPZ1P61923 177 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 CSNK2A1P68400 391 aaPredicted RBP11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 EPS8Q12929 822 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 ZNF311Q5JNZ3 666 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 METTL21CQ5VZV1 264 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 DHDDSQ86SQ9 333 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 CDH24Q86UP0 819 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 STK32CQ86UX6 486 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 LSRQ86X29 649 aaPredicted RBP11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 TUSC5Q8IXB3 177 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 ZNF440Q8IYI8 595 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 C10orf111Q8N326 155 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 CLIP4Q8N3C7 705 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 CADM2Q8N3J6 435 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 BBS10Q8TAM1 723 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 NRGNQ92686 78 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 DACH2Q96NX9 599 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 MED18Q9BUE0 208 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 RASSF1Q9NS23 344 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 KLHL28Q9NXS3 571 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 KLHL13Q9P2N7 655 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 IFT52Q9Y366 437 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 HEATR5AQ86XA9 2040 aa11.26□□□□□ -0.61
PPP1R3F-204ENST00000471261 TMED7-TICAM2A0A0A6YYA0 188 aa11.25□□□□□ -0.61
PPP1R3F-204ENST00000471261 C16orf97H3BN30 126 aa11.25□□□□□ -0.61
PPP1R3F-204ENST00000471261 PGM3O95394 542 aa11.25□□□□□ -0.61
PPP1R3F-204ENST00000471261 FESP07332 822 aa11.25□□□□□ -0.61
PPP1R3F-204ENST00000471261 YES1P07947 543 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms