RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SOX15O60248 233 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR10H2O60403 315 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SCN2BO60939 215 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ITGA10O75578 1167 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 VNN2O95498 520 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 BCHEP06276 602 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 DAOP14920 347 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 RPA2P15927 270 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 EPORP19235 508 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 PTNP21246 168 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 DGKAP23743 735 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 AVPR2P30518 371 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 AGTR1P30556 359 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 DLSTP36957 453 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ADH7P40394 386 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 NSG1P42857 185 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SLC6A11P48066 632 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 GPR15P49685 360 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 HMGA2P52926 109 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 PNLIPRP2P54317 469 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 PCBP4P57723 403 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 RPS26P62854 115 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 HBA1P69905 142 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 CAP1Q01518 475 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ACVR1Q04771 509 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 CACNG1Q06432 222 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ELAVL2Q12926 359 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 AIMP2Q13155 320 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 SURF2Q15527 256 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR8G1Q15617 311 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR7A5Q15622 319 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 RPE65Q16518 533 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ODF4Q2M2E3 257 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 CRY2Q49AN0 593 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 MINDY4Q4G0A6 757 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 NKAPLQ5M9Q1 402 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ANXA8L1Q5VT79 327 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 RNLSQ5VYX0 342 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ZDHHC20Q5W0Z9 365 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FRG2Q64ET8 278 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 MSANTD1Q6ZTZ1 278 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 KRT77Q7Z794 578 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SLC43A2Q8N370 569 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FAM24BQ8N5W8 94 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 CCDC54Q8NEL0 328 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 OR4K5Q8NGD3 323 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ARRDC2Q8TBH0 407 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 LGALS14Q8TCE9 139 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 HAVCR2Q8TDQ0 301 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 RFKQ969G6 155 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ORAI1Q96D31 301 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 MARS2Q96GW9 593 aaKnown RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 PCED1BQ96HM7 432 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 SEC22AQ96IW7 307 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 FRG2BQ96QU4 278 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 LAT2Q9GZY6 243 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 ATG10Q9H0Y0 220 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 WDR13Q9H1Z4 485 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 MVB12BQ9H7P6 319 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 BARX1Q9HBU1 254 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 FGF20Q9NP95 211 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 C1GALT1Q9NS00 363 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 NLE1Q9NVX2 485 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 ASB6Q9NWX5 421 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 VSX1Q9NZR4 365 aaPredicted RBP3.93□□□□□ -1.78
VPS50-210ENST00000471188 FBXL3Q9UKT7 428 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 CAMK2AQ9UQM7 478 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 BACE2Q9Y5Z0 518 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 GBF1Q92538 1859 aa3.93□□□□□ -1.78
VPS50-210ENST00000471188 TRBV23OR9-2A0A075B6M9 112 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 IGKV6D-21A0A0A0MT36 114 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 A0A1W2PPH5 198 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 DAPL1A0PJW8 107 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 SNRPGP15A8MWD9 76 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 H7C0S8 307 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ZNF197O14709 1029 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PRMT3O60678 531 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 CYTIPO60759 359 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 RAMP2O60895 175 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 PRAMEF12O95522 483 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 MT-ND4LP03901 98 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 CELA2BP08218 269 aaPredicted RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 C1SP09871 688 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 THEGLP0DJG4 465 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 ATF1P18846 271 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 CD33P20138 364 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 MMP11P24347 488 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 MAT2AP31153 395 aaKnown RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 HOXC13P31276 330 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 THBS2P35442 1172 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 SPAM1P38567 509 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 HTR5AP47898 357 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 GNG10P50151 68 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 BPIFB3P59826 476 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 RAB4BP61018 213 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 DCDP81605 110 aaKnown RBP3.92□□□□□ -1.78
VPS50-210ENST00000471188 PRKCZQ05513 592 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 MTAPQ13126 283 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 CHIT1Q13231 466 aa3.92□□□□□ -1.78
VPS50-210ENST00000471188 BIKQ13323 160 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms