RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 LYPD3O95274 346 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 THRBP10828 461 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 HOXB6P17509 224 aaKnown RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 CCR4P51679 360 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 POLR2HP52434 150 aaKnown RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 CLDN18P56856 261 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 RGS8P57771 180 aaPredicted RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 HOXC5Q00444 222 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 FOXF1Q12946 379 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 OR1Q1Q15612 314 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 IFI44LQ53G44 452 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 SWT1Q5T5J6 900 aaKnown RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 ULK3Q6PHR2 472 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 PIWIL3Q7Z3Z3 882 aaKnown RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 ATG4DQ86TL0 474 aaPredicted RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 RANBP3LQ86VV4 465 aaPredicted RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 AQP12AQ8IXF9 295 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 TMCO5AQ8N6Q1 288 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 ZNF563Q8TA94 476 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 FAM57AQ8TBR7 257 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 ZPLD1Q8TCW7 415 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 GEMIN6Q8WXD5 167 aaKnown RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 SLC38A4Q969I6 547 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 UTP4Q969X6 686 aaKnown RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 C3orf49Q96BT1 292 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 TPD52L3Q96J77 140 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 SFXN2Q96NB2 322 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 MCHR1Q99705 422 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 PRR14Q9BWN1 585 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 AMBRA1Q9C0C7 1298 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 IL1RAPQ9NPH3 570 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 ACAD8Q9UKU7 415 aa11.39□□□□□ -0.59
SND1-209ENST00000470723 RPH3AQ9Y2J0 694 aaPredicted RBP11.39□□□□□ -0.59
SND1-209ENST00000470723 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
SND1-209ENST00000470723 TMED7-TICAM2A0A0A6YYA0 188 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 A0A1B0GWA3 101 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 SHISA8B8ZZ34 492 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 M0R3H8 397 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 ZNF682O95780 498 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 THY1P04216 161 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 STSP08842 583 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 PNMTP11086 282 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 UMPSP11172 480 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 IL11P20809 199 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 ATP6V1B2P21281 511 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 TACR3P29371 465 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 PTGER4P35408 488 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 OR1E2P47887 323 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 STARP49675 285 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 SUCLG1P53597 346 aaKnown RBP11.38□□□□□ -0.59
SND1-209ENST00000470723 HSF1Q00613 529 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 RBPJQ06330 500 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 MERTKQ12866 999 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 IGFBP7Q16270 282 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 ENTPD8Q5MY95 495 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 RAET1LQ5VY80 246 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 ADGRE4PQ86SQ3 457 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 GGNQ86UU5 652 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 TSPYL5Q86VY4 417 aaPredicted RBP11.38□□□□□ -0.59
SND1-209ENST00000470723 DOLPP1Q86YN1 238 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 PM20D2Q8IYS1 436 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 LILRA2Q8N149 483 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 OR5M1Q8NGP8 315 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 OR10Q1Q8NGQ4 319 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 MCUR1Q96AQ8 359 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 SLC47A1Q96FL8 570 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 HSH2DQ96JZ2 352 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 ADGRG7Q96K78 797 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 POTEKPQ9BYX7 375 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 MAGIXQ9H6Y5 334 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 CTPS2Q9NRF8 586 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 SERINC1Q9NRX5 453 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 CHRNA9Q9UGM1 479 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 TRAPPC4Q9Y296 219 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 TMED7Q9Y3B3 224 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 RELNP78509 3460 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 MYO7BQ6PIF6 2116 aa11.38□□□□□ -0.59
SND1-209ENST00000470723 HIVEP3Q5T1R4 2406 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 A0A087WUJ7 227 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 TCRBV3S1A0A5B6 114 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 TRAPPC13A5PLN9 417 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 NPIPA2E9PIF3 369 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 NPIPA3F8WFD2 350 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 SLC19A2O60779 497 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 NPIPB7O75200 414 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 PRSS23O95084 383 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 OR5F1O95221 314 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 TNFRSF1BP20333 461 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 CDH12P55289 794 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 SELENBP1Q13228 472 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 SF3B4Q15427 424 aaKnown RBP eCLIP11.37□□□□□ -0.591e-15■■□□□ 12
SND1-209ENST00000470723 CTU2Q2VPK5 515 aaKnown RBP11.37□□□□□ -0.59
SND1-209ENST00000470723 DCST1Q5T197 706 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 WLSQ5T9L3 541 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 CYP2R1Q6VVX0 501 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 ESPNLQ6ZVH7 1005 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 FKBP9P1Q75LS8 142 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 PRICKLE2Q7Z3G6 844 aa11.37□□□□□ -0.59
SND1-209ENST00000470723 FAM86B1Q8N7N1 296 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms