RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 KCNJ5P48544 419 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 ART1P52961 327 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 PPP2R2AP63151 447 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 SYT14P1Q58G82 188 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 GRINAQ7Z429 371 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 FUNDC1Q8IVP5 155 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 ARFGAP2Q8N6H7 521 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 ATP6V1C2Q8NEY4 427 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 MBD6Q96DN6 1003 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 AURKBQ96GD4 344 aaPredicted RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 REXO5Q96IC2 774 aaKnown RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 PAIP1Q9H074 479 aaKnown RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 BCO1Q9HAY6 547 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 SLC52A3Q9NQ40 469 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 SERINC1Q9NRX5 453 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 CCM2LQ9NUG4 571 aaPredicted RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 INTS9Q9NV88 658 aaKnown RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 ARGLU1Q9NWB6 273 aaPredicted RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 P2RX2Q9UBL9 471 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 MED13LQ71F56 2210 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 ITPR3Q14573 2671 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 CASKO14936 926 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 PRKD3O94806 890 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 ANP32DO95626 131 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 DBIP07108 87 aaKnown RBP12.52□□□□□ -0.41
COMMD3-208ENST00000470045 TFPTP0C1Z6 253 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 BMP2P12643 396 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 PSMB1P20618 241 aaKnown RBP12.52□□□□□ -0.41
COMMD3-208ENST00000470045 ENPP1P22413 925 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 DSTNP60981 165 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 STX1BP61266 288 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 IRX1P78414 480 aaPredicted RBP12.52□□□□□ -0.41
COMMD3-208ENST00000470045 POU4F3Q15319 338 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 TMEM201Q5SNT2 666 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 C6orf10Q5SRN2 563 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 LRIF1Q5T3J3 769 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 MRPL2Q5T653 305 aaKnown RBP12.52□□□□□ -0.41
COMMD3-208ENST00000470045 FBXW10Q5XX13 1052 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 ABLIM2Q6H8Q1 611 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 BLOC1S3Q6QNY0 202 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 TFAP2EQ6VUC0 442 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 BEND4Q6ZU67 534 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 C22orf34Q6ZV56 151 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 ZNF550Q7Z398 422 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 NUFIP2Q7Z417 695 aaKnown RBP12.52□□□□□ -0.41
COMMD3-208ENST00000470045 TUSC5Q8IXB3 177 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 ZNF563Q8TA94 476 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 OR5B2Q96R09 309 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 PSD2Q9BQI7 771 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 MED18Q9BUE0 208 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 OR10A4Q9H209 315 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 CTPS2Q9NRF8 586 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 TMEM45AQ9NWC5 275 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.41
COMMD3-208ENST00000470045 ZNF226Q9NYT6 803 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 CALML5Q9NZT1 146 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 EDARQ9UNE0 448 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 PLEKHA6Q9Y2H5 1048 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 SPIN1Q9Y657 262 aaPredicted RBP12.52□□□□□ -0.41
COMMD3-208ENST00000470045 GMEB1Q9Y692 573 aa12.52□□□□□ -0.41
COMMD3-208ENST00000470045 UQCRHLA0A096LP55 91 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 A0A096LPI6 279 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 CDHR4A6H8M9 788 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 AP3D1O14617 1153 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 CYTIPO60759 359 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 GCM2O75603 506 aaPredicted RBP12.51□□□□□ -0.41
COMMD3-208ENST00000470045 SASH3O75995 380 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 ATE1O95260 518 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 RAF1P04049 648 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 BCHEP06276 602 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 THBDP07204 575 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 YES1P07947 543 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 PPP3CBP16298 524 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 IL7RP16871 459 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 KLK2P20151 261 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 DNASE1P24855 282 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
COMMD3-208ENST00000470045 LOXP28300 417 aaPredicted RBP12.51□□□□□ -0.41
COMMD3-208ENST00000470045 RYKP34925 604 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 CRATP43155 626 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 CLK1P49759 484 aaKnown RBP12.51□□□□□ -0.41
COMMD3-208ENST00000470045 DIO1P49895 249 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 ATP4BP51164 291 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 CRISP3P54108 245 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 AQP5P55064 265 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 GNA13Q14344 377 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 RGNQ15493 299 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 EXOC3L2Q2M3D2 409 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 SLC2A7Q6PXP3 512 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 TMPPEQ6ZT21 453 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 STK32CQ86UX6 486 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 ADGRG3Q86Y34 549 aa12.51□□□□□ -0.41
COMMD3-208ENST00000470045 PEX5LQ8IYB4 626 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms