RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 BMP7P18075 431 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 ENDOUP21128 410 aaKnown RBP16.56■□□□□ 0.24
SMC4-211ENST00000469858 TTKP33981 857 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 EXT1Q16394 746 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 ATG4DQ86TL0 474 aaPredicted RBP16.56■□□□□ 0.24
SMC4-211ENST00000469858 OAFQ86UD1 273 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 STX19Q8N4C7 294 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 FAM26EQ8N5C1 309 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 DEFB124Q8NES8 71 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 OR11G2Q8NGC1 345 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 OR51A7Q8NH64 312 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 TMEM163Q8TC26 289 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 SLC22A8Q8TCC7 542 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 FAR1Q8WVX9 515 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 MUL1Q969V5 352 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 TMCO6Q96DC7 493 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 LRR1Q96L50 414 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 HHATLQ9HCP6 504 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 TCFL5Q9UL49 500 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 PCDHGA3Q9Y5H0 932 aa16.56■□□□□ 0.24
SMC4-211ENST00000469858 MAN1A2O60476 641 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 INMTO95050 263 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 RCBTB2O95199 551 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 STSP08842 583 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 PNMTP11086 282 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 TMED10P49755 219 aaKnown RBP16.55■□□□□ 0.24
SMC4-211ENST00000469858 EFNB1P98172 346 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 ST3GAL4Q11206 333 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 TOMM34Q15785 309 aaPredicted RBP16.55■□□□□ 0.24
SMC4-211ENST00000469858 OCLNQ16625 522 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 SYT14P1Q58G82 188 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 GTF2IRD2BQ6EKJ0 949 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 RPL13AP3Q6NVV1 102 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 GTF2IRD2Q86UP8 949 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 OR13F1Q8NGS4 319 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 OR5W2Q8NH69 310 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 DUSP19Q8WTR2 217 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 HGDQ93099 445 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 NMD3Q96D46 503 aaKnown RBP16.55■□□□□ 0.24
SMC4-211ENST00000469858 PLEKHA8Q96JA3 519 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 ENKD1Q9H0I2 346 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 UBQLN3Q9H347 655 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 RSL24D1Q9UHA3 163 aaKnown RBP16.55■□□□□ 0.24
SMC4-211ENST00000469858 KNTC1P50748 2209 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 NSG1A0A0A6YYJ2 146 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 EFCAB10A6NFE3 127 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 SOCS6O14544 535 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 HCN1O60741 890 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 SEC14L2O76054 403 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 NAGAP17050 411 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 TACR3P29371 465 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 OTX2P32243 289 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 SLC1A3P43003 542 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 P2RX1P51575 399 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 CBFBQ13951 182 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 GPR107Q5VW38 600 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 PLAG1Q6DJT9 500 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 SMARCD3Q6STE5 483 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 THSD4Q6ZMP0 1018 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 RORBQ92753 470 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 SGTBQ96EQ0 304 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 RASL10BQ96S79 203 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 SPRY4Q9C004 299 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 ZNF160Q9HCG1 818 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 ACOT13Q9NPJ3 140 aa16.55■□□□□ 0.24
SMC4-211ENST00000469858 IGKV1D-42A0A075B6H8 117 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 C2orf72A6NCS6 295 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 ZNF99A8MXY4 864 aaPredicted RBP16.54■□□□□ 0.24
SMC4-211ENST00000469858 LRRN3E7EW58 273 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 ADAM10O14672 748 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 SURF4O15260 269 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 IGHEP01854 428 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 PGCP20142 388 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 MEDAGQ5VYS4 303 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 OR5M10Q6IEU7 315 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 LYPD8Q6UX82 237 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 GLRX5Q86SX6 157 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 CACTIN-AS1Q8N1I8 211 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 CYP4Z2PQ8N1L4 340 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 FGF11Q92914 225 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 ZNF582Q96NG8 517 aaPredicted RBP16.54■□□□□ 0.24
SMC4-211ENST00000469858 CCNL2Q96S94 520 aaPredicted RBP16.54■□□□□ 0.24
SMC4-211ENST00000469858 GALNT9Q9HCQ5 603 aa16.54■□□□□ 0.24
SMC4-211ENST00000469858 CNOT2Q9NZN8 540 aaKnown RBP16.54■□□□□ 0.24
SMC4-211ENST00000469858 EP300Q09472 2414 aaPredicted RBP16.53■□□□□ 0.24
SMC4-211ENST00000469858 RAB40ALP0C0E4 278 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 SLC15A1P46059 708 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 ST13P50502 369 aaKnown RBP16.53■□□□□ 0.24
SMC4-211ENST00000469858 GP2P55259 537 aaKnown RBP16.53■□□□□ 0.24
SMC4-211ENST00000469858 ZNF91Q05481 1191 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 SLC25A30Q5SVS4 291 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 POMZP3Q6PJE2 187 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 NDUFAF7Q7L592 441 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 NUP54Q7Z3B4 507 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 MISPQ8IVT2 679 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 OR10G3Q8NGC4 313 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 B4GALNT2Q8NHY0 566 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 M1APQ8TC57 530 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 TNFRSF13CQ96RJ3 184 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 LRFN3Q9BTN0 628 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms