RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 OR2V1Q8NHB1 315 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 SLC38A5Q8WUX1 472 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 WDR60Q8WVS4 1066 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 OIT3Q8WWZ8 545 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 CNOT9Q92600 299 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 PIGTQ969N2 578 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 STARD4Q96DR4 205 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 MRGPRX4Q96LA9 322 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 KLHL15Q96M94 604 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 THUMPD1Q9NXG2 353 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 PAQR5Q9NXK6 330 aaPredicted RBP12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 SLC25A37Q9NYZ2 338 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 NDUFAF1Q9Y375 327 aa12.59□□□□□ -0.39
CCHCR1-211ENST00000467553 NAV3Q8IVL0 2385 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 ADAMDEC1O15204 470 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 SMNDC1O75940 238 aaKnown RBP eCLIP12.58□□□□□ -0.47e-7■■□□□ 14.2
CCHCR1-211ENST00000467553 AQP8O94778 261 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 NUDT7P0C024 238 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 CD8BP10966 210 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 FCGR2AP12318 317 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 CD53P19397 219 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 FPR1P21462 350 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 ELK4P28324 431 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 SHC1P29353 583 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 CD79BP40259 229 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 MDH1P40925 334 aaKnown RBP12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 SLC6A8P48029 635 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 SIRPAP78324 504 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 MERTKQ12866 999 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 CTU2Q2VPK5 515 aaKnown RBP12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 SLC25A53Q5H9E4 307 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 RPS26P11Q5JNZ5 115 aaPredicted RBP12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 METTL21CQ5VZV1 264 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 VRK2Q86Y07 508 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 MSRB3Q8IXL7 192 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 OR52P1PQ8NH57 321 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 TMEM234Q8WY98 164 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 ST8SIA1Q92185 356 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 PMM1Q92871 262 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 ADGRG7Q96K78 797 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF385DQ9H6B1 395 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 RNF122Q9H9V4 155 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 FANCFQ9NPI8 374 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 SERINC1Q9NRX5 453 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 VAPAQ9P0L0 249 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 LEF1Q9UJU2 399 aaPredicted RBP12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 MCTS1Q9ULC4 181 aaKnown RBP12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 CLEC4AQ9UMR7 237 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF232Q9UNY5 417 aa12.58□□□□□ -0.4
CCHCR1-211ENST00000467553 A0A0G2JPF8 293 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 GJE1A6NN92 205 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 EVPLLA8MZ36 301 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 C5orf58C9J3I9 102 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 ANGPT2O15123 496 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 HNRNPCL1O60812 293 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 DNAJA2O60884 412 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 NTN1O95631 604 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 PLGP00747 810 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 HOXB9P17482 250 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 PPIBP23284 216 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 SLC7A1P30825 629 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 CPOXP36551 454 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 KIR2DL2P43627 348 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 IDH2P48735 452 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 FADDQ13158 208 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 MRPL2Q5T653 305 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 CGB2Q6NT52 195 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 VWA1Q6PCB0 445 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 BTLAQ7Z6A9 289 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 CMIPQ8IY22 773 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 FAM71CQ8NEG0 241 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 MAL2Q969L2 176 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 REXO5Q96IC2 774 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 C18orf12Q96KH6 178 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 CACYBPQ9HB71 228 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 TIGARQ9NQ88 270 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 ACER3Q9NUN7 267 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 RLIMQ9NVW2 624 aa12.57□□□□□ -0.4
CCHCR1-211ENST00000467553 A0A1W2PNR3 127 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 C16orf97H3BN30 126 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 AP3D1O14617 1153 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 NID1P14543 1247 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 POU2F1P14859 743 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 PPP3CBP16298 524 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 CCNA2P20248 432 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 RPS4Y1P22090 263 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 CRYGSP22914 178 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 SELENBP1Q13228 472 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 LARS2Q15031 903 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 GTF2IRD2BQ6EKJ0 949 aa12.56□□□□□ -0.4
CCHCR1-211ENST00000467553 PRSS57Q6UWY2 283 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms