RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SLC9B1Q4ZJI4 515 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 METTL2BQ6P1Q9 378 aaKnown RBP8.82□□□□□ -1
HDAC3-203ENST00000467533 SPATC1Q76KD6 591 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 SZRD1Q7Z422 152 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 PTGR2Q8N8N7 351 aaPredicted RBP8.82□□□□□ -1
HDAC3-203ENST00000467533 NUP37Q8NFH4 326 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 OR6Y1Q8NGX8 325 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 RFWD2Q8NHY2 731 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 RHEBL1Q8TAI7 183 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 C16orf78Q8WTQ4 265 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 RDH5Q92781 318 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 DVL3Q92997 716 aaPredicted RBP8.82□□□□□ -1
HDAC3-203ENST00000467533 TMIGD2Q96BF3 282 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 RAB39BQ96DA2 213 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 ELP4Q96EB1 424 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 GPA33Q99795 319 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 RBM4BQ9BQ04 359 aaKnown RBP8.82□□□□□ -1
HDAC3-203ENST00000467533 EBPLQ9BY08 206 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 GLIPR2Q9H4G4 154 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 C7orf69Q9H7B7 122 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 OBP2BQ9NPH6 170 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 MIEF1Q9NQG6 463 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 SLC7A10Q9NS82 523 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 ZNF275Q9NSD4 429 aaPredicted RBP8.82□□□□□ -1
HDAC3-203ENST00000467533 VPS29Q9UBQ0 182 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 SNX6Q9UNH7 406 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 ACTL7BQ9Y614 415 aa8.82□□□□□ -1
HDAC3-203ENST00000467533 TMEM129A0AVI4 362 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 M0R233 179 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 PIP5K1BO14986 540 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 KCNK2O95069 426 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 HPXP02790 462 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 PRPS2P11908 318 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 COL8A2P25067 703 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 CRABP2P29373 138 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 PRKAG1P54619 331 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 UBE2NP61088 152 aaKnown RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 RAE1P78406 368 aaKnown RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 QPRTQ15274 297 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 NDUFAF6Q330K2 333 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 ARMCX4Q5H9R4 360 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 CCNJQ5T5M9 372 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 TSPO2Q5TGU0 170 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 FAM219BQ5XKK7 198 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 SAXO2Q658L1 398 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 TMPPEQ6ZT21 453 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 MTERF4Q7Z6M4 381 aaKnown RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 MTDHQ86UE4 582 aaKnown RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 GSPT2Q8IYD1 628 aaKnown RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 RIBC1Q8N443 379 aaPredicted RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 KIR3DL3Q8N743 410 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 COX18Q8N8Q8 333 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 CDRT4Q8N9R6 151 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 SLC16A11Q8NCK7 471 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 GPR119Q8TDV5 335 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 DNAJA3Q96EY1 480 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 NSUN5Q96P11 429 aaKnown RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 ZNF416Q9BWM5 594 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 QRSL1Q9H0R6 528 aaKnown RBP8.81□□□□□ -1
HDAC3-203ENST00000467533 SEC61A2Q9H9S3 476 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 OXSMQ9NWU1 459 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 MID2Q9UJV3 735 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 PCTPQ9UKL6 214 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 MMP24Q9Y5R2 645 aa8.81□□□□□ -1
HDAC3-203ENST00000467533 OR6C65A6NJZ3 312 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 C3orf80F5H4A9 247 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 H3BNH8 94 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 GTPBP1O00178 669 aaKnown RBP8.8□□□□□ -1
HDAC3-203ENST00000467533 PGRMC1O00264 195 aaKnown RBP8.8□□□□□ -1
HDAC3-203ENST00000467533 SKAP2O75563 359 aaPredicted RBP8.8□□□□□ -1
HDAC3-203ENST00000467533 PRB2P02812 416 aaPredicted RBP8.8□□□□□ -1
HDAC3-203ENST00000467533 TFPIP10646 304 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 ACP2P11117 423 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TCN1P20061 433 aaPredicted RBP8.8□□□□□ -1
HDAC3-203ENST00000467533 DDCP20711 480 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 GATA3P23771 443 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TYK2P29597 1187 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 LCN1P31025 176 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TIA1P31483 386 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC3-203ENST00000467533 GPC1P35052 558 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 SPRP35270 261 aaPredicted RBP8.8□□□□□ -1
HDAC3-203ENST00000467533 MAGEA8P43361 318 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 SLC16A1P53985 500 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TMEM33P57088 247 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TUBA1BP68363 451 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TUBA4AP68366 448 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 HGFACQ04756 655 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 ACSM2AQ08AH3 577 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 C2orf80Q0P641 193 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 HSPB3Q12988 150 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 SNTB2Q13425 540 aaKnown RBP8.8□□□□□ -1
HDAC3-203ENST00000467533 PRSS53Q2L4Q9 553 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 FAM83EQ2M2I3 478 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TBRG1Q3YBR2 411 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 TIGD2Q4W5G0 525 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 SPIN4Q56A73 249 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 SYT14P1Q58G82 188 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 SLC25A53Q5H9E4 307 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 VAX1Q5SQQ9 334 aa8.8□□□□□ -1
HDAC3-203ENST00000467533 ACSM2BQ68CK6 577 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms