RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 KLRC3Q07444 240 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 BCL2L1Q07817 233 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 SLC15A2Q16348 729 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 PRR30Q53SZ7 412 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZSCAN25Q6NSZ9 544 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 PMF1Q6P1K2 205 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 EFL1Q7Z2Z2 1120 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 LCA5Q86VQ0 697 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZNF677Q86XU0 584 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 NRMQ8IXM6 262 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 UBQLNLQ8IYU4 475 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 LRRC75A-AS1Q8N1F1 130 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 BHLHE23Q8NDY6 225 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR4D9Q8NGE8 314 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR5L2Q8NGL0 311 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR9A1PQ8NGU1 263 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 MAIP1Q8WWC4 291 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 HTR3CQ8WXA8 447 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 B3GALT6Q96L58 329 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 CCNL2Q96S94 520 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZNF184Q99676 751 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 PARD6BQ9BYG5 372 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 CHIAQ9BZP6 476 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 CDH9Q9ULB4 789 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 CLEC4EQ9ULY5 219 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 POLDIP2Q9Y2S7 368 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 TNRQ92752 1358 aa3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 RPAP1Q9BWH6 1393 aaPredicted RBP3.21□□□□□ -1.9
CDC42BPA-211ENST00000466538 IGHV1OR15-1A0A075B7D0 117 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 FAM240BA0A1B0GVZ2 78 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 MPHOSPH10O00566 681 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 TNFSF11O14788 317 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR10H3O60404 316 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 PALMO75781 387 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 AP2A1O95782 977 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 LGALS2P05162 132 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 ALOX5P09917 674 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 CCDC166P0CW27 439 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 COX5AP20674 150 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 RPL13AP40429 203 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 CCT3P49368 545 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 HSPA2P54652 639 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 CCDC173Q0VFZ6 552 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 ELAVL3Q14576 367 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 ISXQ2M1V0 245 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 TRIM16LQ309B1 348 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 C1orf220Q5T0J3 134 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 TPGS2Q68CL5 300 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR4F3Q6IEY1 312 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 SKA3Q8IX90 412 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 ANKRD49Q8WVL7 239 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 NEIL2Q969S2 332 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 NOL4LQ96MY1 436 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 RPRD1AQ96P16 312 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 IL4I1Q96RQ9 567 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 SECISBP2Q96T21 854 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 CAPS2Q9BXY5 557 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 CLEC4AQ9UMR7 237 aa3.2□□□□□ -1.9
CDC42BPA-211ENST00000466538 IGLV3-10A0A075B6K4 115 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 KLF18A0A0U1RQI7 1052 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 EPOPA6NHQ4 379 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 ERI2A8K979 691 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 PRKAB2O43741 272 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 LYPD3O95274 346 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 IL1BP01584 269 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 OR8U8P0C7N1 319 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 POU2F1P14859 743 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 PSMB1P20618 241 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 ANXA13P27216 316 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 GCAP28676 217 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 MAP3K8P41279 467 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 BTDP43251 543 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 CASP4P49662 377 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 CUL1Q13616 776 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 ARL6IP1Q15041 203 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 SLC35F2Q8IXU6 374 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 ATP6V0D2Q8N8Y2 350 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 PAQR8Q8TEZ7 354 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 SEC22AQ96IW7 307 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 SMIM14Q96QK8 99 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 FN3KRPQ9HA64 309 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 RAB18Q9NP72 206 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 TMEM9Q9P0T7 183 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 TIMM10BQ9Y5J6 103 aa3.19□□□□□ -1.9
CDC42BPA-211ENST00000466538 IDSB3KWA1 339 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 TRDCB7Z8K6 153 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 POLR2DO15514 142 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 PFKFB2O60825 505 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 SLITRK3O94933 977 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 IGKV3-15P01624 115 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 HSPB1P04792 205 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 RFC4P35249 363 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 RGRP47804 291 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 CRYBB1P53674 252 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 DIO3P55073 304 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 RPL23AP62750 156 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 HMGN5P82970 282 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 ASPHQ12797 758 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 ZMYND11Q15326 602 aa3.18□□□□□ -1.9
CDC42BPA-211ENST00000466538 FILIP1LQ4L180 1135 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms