RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 CDC6Q99741 560 aa19.33■□□□□ 0.68
PPP1R3F-203ENST00000466508 CDCA4Q9BXL8 241 aa19.33■□□□□ 0.68
PPP1R3F-203ENST00000466508 ZBTB20Q9HC78 741 aaPredicted RBP19.33■□□□□ 0.68
PPP1R3F-203ENST00000466508 ICAM5Q9UMF0 924 aa19.33■□□□□ 0.68
PPP1R3F-203ENST00000466508 GPR52Q9Y2T5 361 aa19.33■□□□□ 0.68
PPP1R3F-203ENST00000466508 PTRH2Q9Y3E5 179 aaKnown RBP19.33■□□□□ 0.68
PPP1R3F-203ENST00000466508 TMEM200CA6NKL6 621 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 TMX2-CTNND1H3BSU7 103 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 GNB5O14775 395 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 FADS1O60427 444 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 EIF4E2O60573 245 aaKnown RBP19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 HCN1O60741 890 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 NOL3O60936 208 aaKnown RBP19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 TRMUO75648 421 aaKnown RBP19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 CH25HO95992 272 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 HMGN1P05114 100 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 LCKP06239 509 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 UMODP07911 640 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 PNMTP11086 282 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 EFR3AQ14156 821 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 IRF3Q14653 427 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 SMARCD3Q6STE5 483 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 CYP4Z2PQ8N1L4 340 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 SH3YL1Q96HL8 342 aaPredicted RBP19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 FUNDC2Q9BWH2 189 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 SLC19A3Q9BZV2 496 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 PCNX3Q9H6A9 2034 aa19.32■□□□□ 0.68
PPP1R3F-203ENST00000466508 BHLHE40O14503 412 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 ZFAND5O76080 213 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 MST1P26927 711 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 PSMB9P28065 219 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 PCSK6P29122 969 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 ST13P50502 369 aaKnown RBP19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 SPEM2Q0P670 501 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 ISXQ2M1V0 245 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 RAB11FIP2Q7L804 512 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 ATG4DQ86TL0 474 aaPredicted RBP19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 OAFQ86UD1 273 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 OR2Y1Q8NGV0 311 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 C9orf43Q8TAL5 461 aaPredicted RBP19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 RAB2BQ8WUD1 216 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 PLEKHA8Q96JA3 519 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 ZPBPQ9BS86 351 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 PCNX2A6NKB5 2137 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 TRAV27A0A087WT01 109 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 WWP2O00308 870 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 PRODHO43272 600 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 ZNF354AO60765 605 aaPredicted RBP19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 PTP4A3O75365 173 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 STK17BO94768 372 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 SLC1A3P43003 542 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 MLLT10P55197 1068 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 PCOLCEQ15113 449 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 CDCP2Q5VXM1 449 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 ENKD1Q9H0I2 346 aa19.31■□□□□ 0.68
PPP1R3F-203ENST00000466508 KNTC1P50748 2209 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 ELOA3DA6NLF2 546 aaPredicted RBP19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 SNTNA6NMZ2 147 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 KDM4EB2RXH2 506 aaPredicted RBP19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 LRP3O75074 770 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 NADKO95544 446 aaPredicted RBP19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 ADORA3P0DMS8 318 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 NAGAP17050 411 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 ELOA3BQ3SY89 546 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 THSD4Q6ZMP0 1018 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 ERI1Q8IV48 349 aaKnown RBP19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 SLC43A2Q8N370 569 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 LNX2Q8N448 690 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 ANKK1Q8NFD2 765 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 ELOA3Q8NG57 546 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 OR51A7Q8NH64 312 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 ZNF563Q8TA94 476 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 SGTBQ96EQ0 304 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 LIN37Q96GY3 246 aaPredicted RBP19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 MYOTQ9UBF9 498 aa19.3■□□□□ 0.68
PPP1R3F-203ENST00000466508 HTR3EA5X5Y0 456 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 SCO2O43819 266 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 ADRA2AP08913 450 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 GRK5P34947 590 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 SH3BGRP55822 239 aaPredicted RBP19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 KLHDC3Q9BQ90 382 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 TMEM43Q9BTV4 400 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 DDA1Q9BW61 102 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 C12orf10Q9HB07 376 aa19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.29■□□□□ 0.68
PPP1R3F-203ENST00000466508 IGKV1D-42A0A075B6H8 117 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 IGHV1-45A0A0A0MS14 117 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 TRIM64BA6NI03 449 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 IGF2P01344 180 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 FBXW4P57775 412 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 FHL1Q13642 323 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 TMEM44Q2T9K0 475 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 ANKRD13BQ86YJ7 626 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 MISPQ8IVT2 679 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 OR5W2Q8NH69 310 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 ELP5Q8TE02 316 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 ZNF524Q96C55 264 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 CRELD1Q96HD1 420 aa19.28■□□□□ 0.68
PPP1R3F-203ENST00000466508 TMEM80Q96HE8 168 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms