RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 UGT1A5P35504 534 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 PPT1P50897 306 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 PSG7Q13046 419 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 SNTB2Q13425 540 aaKnown RBP2.89□□□□□ -1.95
LRCH3-211ENST00000466054 HERPUD1Q15011 391 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 ARL6IP1Q15041 203 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 PDK4Q16654 411 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 NADK2Q4G0N4 442 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 PYHIN1Q6K0P9 492 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 KRTAP11-1Q8IUC1 163 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 RNF175Q8N4F7 328 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 PAQR8Q8TEZ7 354 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 THRSPQ92748 146 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 ARHGDIGQ99819 225 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 RHBGQ9H310 441 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 ELOVL3Q9HB03 270 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 BTNL2Q9UIR0 455 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 RPH3ALQ9UNE2 315 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 ERVW-1Q9UQF0 538 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 SLCO1B1Q9Y6L6 691 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 CDH10Q9Y6N8 788 aa2.89□□□□□ -1.95
LRCH3-211ENST00000466054 DDX49Q9Y6V7 483 aaKnown RBP2.89□□□□□ -1.95
LRCH3-211ENST00000466054 PLEKHG1Q9ULL1 1385 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 HELTA6NFD8 242 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 XPO1O14980 1071 aaKnown RBP2.88□□□□□ -1.95
LRCH3-211ENST00000466054 TAPBPO15533 448 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 RS1O15537 224 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 HCRTR1O43613 425 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 GUCA1CO95843 209 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 ATP6V1C1P21283 382 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 ADSSP30520 456 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 FGF9P31371 208 aaPredicted RBP2.88□□□□□ -1.95
LRCH3-211ENST00000466054 TLE4Q04727 773 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 KLHL30Q0D2K2 578 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 RIPK1Q13546 671 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 CUL1Q13616 776 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 IL34Q6ZMJ4 242 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 GDPD3Q7L5L3 318 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 FAM220AQ7Z4H9 259 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 VRK2Q86Y07 508 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 RLN3Q8WXF3 142 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 TMEM101Q96IK0 257 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 SENP8Q96LD8 212 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 AMDHD1Q96NU7 426 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 CCNL2Q96S94 520 aaPredicted RBP2.88□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF670Q9BS34 389 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 MAGT1Q9H0U3 335 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 SIGLEC8Q9NYZ4 499 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 RNF14Q9UBS8 474 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 PHF11Q9UIL8 331 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 SH3BGRL2Q9UJC5 107 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 ATP6V0A2Q9Y487 856 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 CLSPNQ9HAW4 1339 aa2.88□□□□□ -1.95
LRCH3-211ENST00000466054 THSD7BQ9C0I4 1608 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 A0A0J9YXY3 114 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 PINLYPA6NC86 204 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 KIF2AO00139 706 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 ABCD4O14678 606 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 CXCL13O43927 109 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 N4BP1O75113 896 aaKnown RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 IGHG4P01861 327 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 KRT6AP02538 564 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 NR2C1P13056 603 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 HNRNPA2B1P22626 353 aaKnown RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 LEPP41159 167 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 P2RY1P47900 373 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 TDO2P48775 406 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 RGS4P49798 205 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 DAP3P51398 398 aaKnown RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 CBX1P83916 185 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 EIF4EBP2Q13542 120 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 GGTA1PQ4G0N0 100 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 KLF17Q5JT82 389 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 BEND3Q5T5X7 828 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 ATL3Q6DD88 541 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 SLC25A24Q6NUK1 477 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 ACOT7LQ6ZUV0 252 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF683Q8IZ20 524 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 CLEC4FQ8N1N0 589 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 OR52I1Q8NGK6 324 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 OR2T34Q8NGX1 318 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 OR56B4Q8NH76 319 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 CTNNBL1Q8WYA6 563 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 RAB7BQ96AH8 199 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 PGLYRP4Q96LB8 373 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 GAL3ST1Q99999 423 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 KLHDC3Q9BQ90 382 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 RAB33BQ9H082 229 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 NARFLQ9H6Q4 476 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 NANOGQ9H9S0 305 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 CHRNA9Q9UGM1 479 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 MRPS7Q9Y2R9 242 aaKnown RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 AK6Q9Y3D8 172 aaKnown RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 UGT2A1Q9Y4X1 527 aa2.87□□□□□ -1.95
LRCH3-211ENST00000466054 COL4A4P53420 1690 aaPredicted RBP2.87□□□□□ -1.95
LRCH3-211ENST00000466054 ZNF861PO60384 105 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 KIAA0754O94854 1291 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 SUPT7LO94864 414 aa2.86□□□□□ -1.95
LRCH3-211ENST00000466054 LGALS2P05162 132 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms