RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 CD247P20963 164 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 TIMP3P35625 211 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 SMSP52788 366 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 CRYBA2P53672 197 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 CLDN20P56880 219 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 RGS8P57771 180 aaPredicted RBP15.26■□□□□ 0.03
USP39-211ENST00000465282 NCALDP61601 193 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 SRYQ05066 204 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 FXNQ16595 210 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 NRF1Q16656 503 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 RANBP3LQ86VV4 465 aaPredicted RBP15.26■□□□□ 0.03
USP39-211ENST00000465282 GPR32P1Q8NGA4 272 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 PROX1Q92786 737 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 ZNF524Q96C55 264 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 KLHL15Q96M94 604 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 ARHGDIGQ99819 225 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 TUBA1CQ9BQE3 449 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 TTYH2Q9BSA4 534 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 C12orf10Q9HB07 376 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 ADPRHL2Q9NX46 363 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 CHRNA9Q9UGM1 479 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 CD300AQ9UGN4 299 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 FAM215AQ9Y5M1 114 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 DOCK7Q96N67 2140 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 USP9XQ93008 2570 aaPredicted RBP15.25■□□□□ 0.03
USP39-211ENST00000465282 ZNF208O43345 1280 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 EFNA2O43921 213 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 SEMA7AO75326 666 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 UBOX5O94941 541 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 OPN1SWP03999 348 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 PRG2P13727 222 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 GGT1P19440 569 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 ZNF136P52737 540 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 SUCLG1P53597 346 aaKnown RBP15.25■□□□□ 0.03
USP39-211ENST00000465282 CLDN15P56746 228 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 SELENOWP63302 87 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 CYBRD1Q53TN4 286 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 RIPPLY2Q5TAB7 128 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 C3P1Q6ZMU1 363 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 ADGRG3Q86Y34 549 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 UBQLNLQ8IYU4 475 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 OR52E4Q8NGH9 312 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 DNAJA4Q8WW22 397 aaPredicted RBP15.25■□□□□ 0.03
USP39-211ENST00000465282 SMPDL3BQ92485 455 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 FIG4Q92562 907 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 RND1Q92730 232 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 WNT2BQ93097 391 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 CCDC120Q96HB5 630 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 ZFP3Q96NJ6 502 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 TM9SF2Q99805 663 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 CTPS2Q9NRF8 586 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 RPS6KB2Q9UBS0 482 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 OSGIN1Q9UJX0 560 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 PRPF19Q9UMS4 504 aaKnown RBP15.25■□□□□ 0.03
USP39-211ENST00000465282 ZNF175Q9Y473 711 aa15.25■□□□□ 0.03
USP39-211ENST00000465282 KIAA1549Q9HCM3 1950 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 TMED7-TICAM2A0A0A6YYA0 188 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 MBD3L4A6NDZ8 208 aaPredicted RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 MBD3L3A6NE82 208 aaPredicted RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 MBD3L5A6NJ08 208 aaPredicted RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 CLCA1A8K7I4 914 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 EIF1AYO14602 144 aaKnown RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 SEC14L5O43304 696 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 ATP5HO75947 161 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 LDLRP01130 860 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 GLI4P10075 376 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 IL11P20809 199 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 CXCR1P25024 350 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 TACR3P29371 465 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 SLC7A1P30825 629 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 RASSF2P50749 326 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 CARD18P57730 90 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 PMPCAQ10713 525 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 SGCBQ16585 318 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 CTU2Q2VPK5 515 aaKnown RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 TMEM176BQ3YBM2 270 aaPredicted RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 LRRC23Q53EV4 343 aaPredicted RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 SWT1Q5T5J6 900 aaKnown RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 EEF1A1P5Q5VTE0 462 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 HBMQ6B0K9 141 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 XKRXQ6PP77 449 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 RINLQ6ZS11 566 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 COMTD1Q86VU5 262 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 MED12LQ86YW9 2145 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 CADM2Q8N3J6 435 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 OR2V1Q8NHB1 315 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 MBD3L2Q8NHZ7 208 aaPredicted RBP15.24■□□□□ 0.03
USP39-211ENST00000465282 SSC4DQ8WTU2 575 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 ADGRG7Q96K78 797 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 TRIB1Q96RU8 372 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 PCDHAC1Q9H158 963 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 GORASP2Q9H8Y8 452 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 TMEM27Q9HBJ8 222 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 TAS2R1Q9NYW7 299 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 COQ3Q9NZJ6 369 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 MAGEL2Q9UJ55 1249 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 RPS6KA6Q9UK32 745 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 TMED7Q9Y3B3 224 aa15.24■□□□□ 0.03
USP39-211ENST00000465282 HDGFL3Q9Y3E1 203 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms