RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN7-205	ENST00000464870	UBR5	O95071	2799 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	NBAS	A2RRP1	2371 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	TRBV4-1	A0A0J9YWV2	114 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	SHISA8	B8ZZ34	492 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	TNFRSF11B	O00300	401 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	FMO6P	O60774	539 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	SNX4	O95219	450 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	H1F0	P07305	194 aa	Known RBP	11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	PGC	P20142	388 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	PTN	P21246	168 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	SLC6A8	P48029	635 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	SLC34A1	Q06495	639 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	CBFB	Q13951	182 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	QPRT	Q15274	297 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	EXOC3L2	Q2M3D2	409 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	RNFT1	Q5M7Z0	435 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	LPCAT4	Q643R3	524 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	ANKRD34A	Q69YU3	496 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	TIGD3	Q6B0B8	471 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	PACS2	Q86VP3	889 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	NKAIN4	Q8IVV8	208 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	SIAH3	Q8IW03	269 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	HS3ST5	Q8IZT8	346 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	GHDC	Q8N2G8	530 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR4C15	Q8NGM1	316 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR1J4	Q8NGS1	313 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	CENPN	Q96H22	339 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	TMEM41A	Q96HV5	264 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	NPAS1	Q99742	590 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	TTTY12	Q9BZ98	90 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	TRIM2	Q9C040	744 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	REEP1	Q9H902	201 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZFP64	Q9NPA5	681 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	MAN2C1	Q9NTJ4	1040 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	RPS6KB2	Q9UBS0	482 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	SLC7A7	Q9UM01	511 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	VDAC3	Q9Y277	283 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	LYVE1	Q9Y5Y7	322 aa		11.17	□□□□□ -0.62
PTPN7-205	ENST00000464870	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870		A0A0B4J2E0	115 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870		A0A1B0GX12	115 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	TRAPPC13	A5PLN9	417 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	LRRC3C	A6NJW4	275 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	FAM166B	A8MTA8	275 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	E2F6	O75461	281 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR5F1	O95221	314 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	GADD45G	O95257	159 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	RFPL3S	P0C7P2	107 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	PRKACG	P22612	351 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	MSX1	P28360	303 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	COPZ1	P61923	177 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	LSM11	P83369	360 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	FOXO1	Q12778	655 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	TRIP10	Q15642	601 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	LRRC36	Q1X8D7	754 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	FGD3	Q5JSP0	725 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	WBP2NL	Q6ICG8	309 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	TBPL2	Q6SJ96	375 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	WDR88	Q6ZMY6	472 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	OFCC1	Q8IZS5	231 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	LSMEM1	Q8N8F7	131 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	OR5M1	Q8NGP8	315 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	NRG4	Q8WWG1	115 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	RELT	Q969Z4	430 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	C3orf49	Q96BT1	292 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	DHRS1	Q96LJ7	313 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF597	Q96LX8	424 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	PRSS27	Q9BQR3	290 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	BDH2	Q9BUT1	245 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	DEFB127	Q9H1M4	99 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	MED17	Q9NVC6	651 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	TAS2R10	Q9NYW0	307 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	B4GALT7	Q9UBV7	327 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	OSGIN2	Q9Y236	505 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	TENM4	Q6N022	2769 aa		11.16	□□□□□ -0.62
PTPN7-205	ENST00000464870	PDLIM1	O00151	329 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	ADAMDEC1	O15204	470 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	WISP2	O76076	250 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	GLS	O94925	669 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	GP1BB	P13224	206 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	ZNF23	P17027	643 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	CCNA2	P20248	432 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	ELAVL4	P26378	380 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	PEX2	P28328	305 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	TACR3	P29371	465 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	DNAJA1	P31689	397 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	LIMS1	P48059	325 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	HMGA2	P52926	109 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	CASP6	P55212	293 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	SUMO3	P55854	103 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	ST3GAL3	Q11203	375 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	SLC10A1	Q14973	349 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	TRAM2	Q15035	370 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	SEC23B	Q15437	767 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	HYAL4	Q2M3T9	481 aa		11.15	□□□□□ -0.62
PTPN7-205	ENST00000464870	CMPK2	Q5EBM0	449 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms