RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 LIPT1Q9Y234 373 aa23.01■■□□□ 1.27
U2AF1-206ENST00000464750 VPS13CQ709C8 3753 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 ARID1AO14497 2285 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 RFXANKO14593 260 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 SLC22A3O75751 556 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 CHRM4P08173 479 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 ACKR1Q16570 336 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 SYT14P1Q58G82 188 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 COX20Q5RI15 118 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 WFDC8Q8IUA0 241 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 GABRG1Q8N1C3 465 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 ARFGAP2Q8N6H7 521 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 WFDC11Q8NEX6 87 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 PIWIL2Q8TC59 973 aaKnown RBP23■■□□□ 1.27
U2AF1-206ENST00000464750 BCO1Q9HAY6 547 aa23■■□□□ 1.27
U2AF1-206ENST00000464750 ING1Q9UK53 422 aaPredicted RBP23■■□□□ 1.27
U2AF1-206ENST00000464750 SPIN1Q9Y657 262 aaPredicted RBP23■■□□□ 1.27
U2AF1-206ENST00000464750 KLF11O14901 512 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 KLF4O43474 513 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 CYTIPO60759 359 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 GCM2O75603 506 aaPredicted RBP22.99■■□□□ 1.27
U2AF1-206ENST00000464750 IL6P05231 212 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 FESP07332 822 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 DIO1P49895 249 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 LRRC74BQ6ZQY2 392 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 STEAP2Q8NFT2 490 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 OR52B2Q96RD2 323 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 CCDC106Q9BWC9 280 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 CTPS2Q9NRF8 586 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 ZIM2Q9NZV7 527 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 CHRNA9Q9UGM1 479 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 ZFHX3Q15911 3703 aa22.99■■□□□ 1.27
U2AF1-206ENST00000464750 KRT75O95678 551 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 TFPIP10646 304 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 FPR1P21462 350 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 HOXC12P31275 282 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 APOBEC1P41238 236 aaKnown RBP22.98■■□□□ 1.27
U2AF1-206ENST00000464750 RASGEF1BQ0VAM2 473 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 GSTA3Q16772 222 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 TMPPEQ6ZT21 453 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 GRINAQ7Z429 371 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 KRTAP1-3Q8IUG1 177 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 WDR60Q8WVS4 1066 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 CNOT9Q92600 299 aaKnown RBP22.98■■□□□ 1.27
U2AF1-206ENST00000464750 ZNF75CPQ92670 426 aaPredicted RBP22.98■■□□□ 1.27
U2AF1-206ENST00000464750 S100PBPQ96BU1 408 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 ZNF300Q96RE9 604 aaPredicted RBP22.98■■□□□ 1.27
U2AF1-206ENST00000464750 CCL19Q99731 98 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 PIP5K1AQ99755 562 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 DLL4Q9NR61 685 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 SLC6A13Q9NSD5 602 aa22.98■■□□□ 1.27
U2AF1-206ENST00000464750 AGAP5A6NIR3 686 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 SULT2B1O00204 365 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 DIAPH2O60879 1101 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 ADAM11O75078 769 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 NR2F1P10589 423 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 IL32P24001 234 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 CSNK2A1P68400 391 aaPredicted RBP22.97■■□□□ 1.27
U2AF1-206ENST00000464750 TSC22D1Q15714 1073 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 AGBL2Q5U5Z8 902 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 C20orf204Q6ZNR8 217 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 CMIPQ8IY22 773 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 PIGTQ969N2 578 aa22.97■■□□□ 1.27
U2AF1-206ENST00000464750 SDR39U1Q9NRG7 319 aaPredicted RBP22.97■■□□□ 1.27
U2AF1-206ENST00000464750 AP3D1O14617 1153 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 UBDO15205 165 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 SMPD2O60906 423 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 RPS4Y1P22090 263 aaKnown RBP22.96■■□□□ 1.27
U2AF1-206ENST00000464750 NR1H2P55055 460 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 NKX6-1P78426 367 aaPredicted RBP22.96■■□□□ 1.27
U2AF1-206ENST00000464750 SFRP5Q5T4F7 317 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 ZNF704Q6ZNC4 412 aaPredicted RBP22.96■■□□□ 1.27
U2AF1-206ENST00000464750 OR9I1Q8NGQ6 314 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 PLPPR2Q96GM1 343 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 HDHD5Q9BXW7 423 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 USH1CQ9Y6N9 552 aa22.96■■□□□ 1.27
U2AF1-206ENST00000464750 ANP32DO95626 131 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 ADAP00813 363 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 OR3A2P47893 321 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 IDH2P48735 452 aaKnown RBP22.95■■□□□ 1.26
U2AF1-206ENST00000464750 GNA13Q14344 377 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 ABLIM2Q6H8Q1 611 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 ALKBH2Q6NS38 261 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 MSANTD1Q6ZTZ1 278 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 KISS1RQ969F8 398 aaPredicted RBP22.95■■□□□ 1.26
U2AF1-206ENST00000464750 ZNF775Q96BV0 537 aaPredicted RBP22.95■■□□□ 1.26
U2AF1-206ENST00000464750 DNAJA3Q96EY1 480 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 RMND5AQ9H871 391 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 P2RX2Q9UBL9 471 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 PRSS50Q9UI38 385 aa22.95■■□□□ 1.26
U2AF1-206ENST00000464750 ZNF724A8MTY0 619 aa22.94■■□□□ 1.26
U2AF1-206ENST00000464750 ZNF814B7Z6K7 855 aa22.94■■□□□ 1.26
U2AF1-206ENST00000464750 DBIP07108 87 aaKnown RBP22.94■■□□□ 1.26
U2AF1-206ENST00000464750 IL7RP16871 459 aa22.94■■□□□ 1.26
U2AF1-206ENST00000464750 CCNA2P20248 432 aa22.94■■□□□ 1.26
U2AF1-206ENST00000464750 MAGEA8P43361 318 aa22.94■■□□□ 1.26
U2AF1-206ENST00000464750 POLR2JP52435 117 aaKnown RBP22.94■■□□□ 1.26
U2AF1-206ENST00000464750 MVDP53602 400 aa22.94■■□□□ 1.26
U2AF1-206ENST00000464750 GTDC1Q4AE62 458 aa22.94■■□□□ 1.26
U2AF1-206ENST00000464750 MRPL2Q5T653 305 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms