RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TRAF6Q9Y4K3 522 aa9.51□□□□□ -0.89
CBX3-205ENST00000462165 FKBP7Q9Y680 259 aa9.51□□□□□ -0.89
CBX3-205ENST00000462165 ATP23Q9Y6H3 246 aa9.51□□□□□ -0.89
CBX3-205ENST00000462165 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.51□□□□□ -0.89
CBX3-205ENST00000462165 LOC390937A0A1W2PQ73 354 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 G3V2L1 256 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 SULT2B1O00204 365 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 GPR171O14626 319 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 TCF21O43680 179 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 KIAA0513O60268 411 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 TGFAP01135 160 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 ITGA5P08648 1049 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 UBL4AP11441 157 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 EFNA1P20827 205 aaPredicted RBP9.5□□□□□ -0.89
CBX3-205ENST00000462165 NTF4P34130 210 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 ASMTP46597 345 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 CCR4P51679 360 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 MST1LQ2TV78 715 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 SYT14P1Q58G82 188 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 C1QTNF12Q5T7M4 302 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 RNF165Q6ZSG1 346 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 C17orf78Q8N4C9 275 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 TMCO5AQ8N6Q1 288 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 ZNF614Q8N883 585 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 CLHC1Q8NHS4 586 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 PSMA8Q8TAA3 256 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 SLC25A43Q8WUT9 341 aaPredicted RBP9.5□□□□□ -0.89
CBX3-205ENST00000462165 FBXO17Q96EF6 278 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 SORCS2Q96PQ0 1159 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 TRMOQ9BU70 441 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 C1QTNF6Q9BXI9 259 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 PLA2G12AQ9BZM1 189 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 LAT2Q9GZY6 243 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 QRSL1Q9H0R6 528 aaKnown RBP9.5□□□□□ -0.89
CBX3-205ENST00000462165 MYOZ1Q9NP98 299 aaPredicted RBP9.5□□□□□ -0.89
CBX3-205ENST00000462165 SERINC1Q9NRX5 453 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 DCDC2Q9UHG0 476 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 BAIAP2L1Q9UHR4 511 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 EMCNQ9ULC0 261 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 TMED5Q9Y3A6 229 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 PTGDR2Q9Y5Y4 395 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 KCNE3Q9Y6H6 103 aa9.5□□□□□ -0.89
CBX3-205ENST00000462165 SERINC4A6NH21 518 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 PDLIM1O00151 329 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 MRPL33O75394 65 aaKnown RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 KRT16P08779 473 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 MYL2P10916 166 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 NEFHP12036 1026 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 ZNF23P17027 643 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 DDX5P17844 614 aaKnown RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 ECHS1P30084 290 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 CCT3P49368 545 aaKnown RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 SLC16A1P53985 500 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 SESN3P58005 492 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 DNAJB13P59910 316 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 RPL38P63173 70 aaKnown RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 CR1LQ2VPA4 569 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 RFTN2Q52LD8 501 aaPredicted RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 PDZK1Q5T2W1 519 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 CLEC6AQ6EIG7 209 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 ZYG11AQ6WRX3 759 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 R3HCC1LQ7Z5L2 792 aaKnown RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 ZNF540Q8NDQ6 660 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 C1orf162Q8NEQ5 155 aaPredicted RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 OR56A1Q8NGH5 318 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 OR2T11Q8NH01 316 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 PIGXQ8TBF5 258 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 C3orf49Q96BT1 292 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 ZHX1-C8orf76Q96EF9 292 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 C1orf159Q96HA4 380 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 FOXN4Q96NZ1 517 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 THUMPD3Q9BV44 507 aaKnown RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 NMUR2Q9GZQ4 415 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 SLC17A5Q9NRA2 495 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 GPATCH2Q9NW75 528 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 ATP6V1HQ9UI12 483 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 DCTN4Q9UJW0 460 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 FAF1Q9UNN5 650 aaPredicted RBP9.49□□□□□ -0.89
CBX3-205ENST00000462165 AMDHD2Q9Y303 409 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 MEGF8Q7Z7M0 2845 aa9.49□□□□□ -0.89
CBX3-205ENST00000462165 ATP6V1G2-DDX39BF2Z307 99 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 LSM1O15116 133 aaKnown RBP9.48□□□□□ -0.89
CBX3-205ENST00000462165 SCAMP2O15127 329 aaKnown RBP9.48□□□□□ -0.89
CBX3-205ENST00000462165 DNPH1O43598 174 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 URI1O94763 535 aaPredicted RBP9.48□□□□□ -0.89
CBX3-205ENST00000462165 PMS2P2O95744 297 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 ABHD2P08910 425 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 ITGA2P17301 1181 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 PGCP20142 388 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 CFPP27918 469 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 ETF1P62495 437 aaKnown RBP9.48□□□□□ -0.89
CBX3-205ENST00000462165 SLC25A3Q00325 362 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 CKAP4Q07065 602 aaKnown RBP9.48□□□□□ -0.89
CBX3-205ENST00000462165 MERTKQ12866 999 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 SKP2Q13309 424 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 TP53BP2Q13625 1128 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 ZNF141Q15928 474 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 IQCCQ4KMZ1 466 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 CFAP157Q5JU67 520 aa9.48□□□□□ -0.89
CBX3-205ENST00000462165 C12orf54Q6X4T0 127 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms