RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 NHSL2Q5HYW2 709 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 FAM91A1Q658Y4 838 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 NET1Q7Z628 596 aaPredicted RBP13.2□□□□□ -0.3
NCK1-202ENST00000460960 CALHM3Q86XJ0 350 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 MED12LQ86YW9 2145 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 LRRC75A-AS1Q8N1F1 130 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 OR4K17Q8NGC6 315 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 OR5M1Q8NGP8 315 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 SPATA3Q8NHX4 192 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 ZPLD1Q8TCW7 415 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 PIK3IP1Q96FE7 263 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 TM9SF2Q99805 663 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 RAD21L1Q9H4I0 556 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 NME4O00746 187 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 SMNDC1O75940 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
NCK1-202ENST00000460960 PGM3O95394 542 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 ACTL6AO96019 429 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 GUSBP08236 651 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 HPGDP15428 266 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 PRDX6P30041 224 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 B3GALT5-AS1P59052 145 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 HPCAP84074 193 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 CDK6Q00534 326 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 C17orf67Q0P5P2 114 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 FGFBP1Q14512 234 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 TOMM34Q15785 309 aaPredicted RBP13.19□□□□□ -0.3
NCK1-202ENST00000460960 CYP51A1Q16850 503 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 GRAMD2AQ8IUY3 354 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 SLC15A3Q8IY34 581 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 PCYOX1LQ8NBM8 494 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 OR8J3Q8NGG0 315 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 OR14L1PQ8NHC6 308 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 NANOS1Q8WY41 292 aaKnown RBP13.19□□□□□ -0.3
NCK1-202ENST00000460960 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
NCK1-202ENST00000460960 CMTM5Q96DZ9 223 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 C1GALT1C1Q96EU7 318 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 ZFP3Q96NJ6 502 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 PIP5K1AQ99755 562 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 OR2B2Q9GZK3 357 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 HOXD1Q9GZZ0 328 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 TMEM38AQ9H6F2 299 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 GID8Q9NWU2 228 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 KLHL28Q9NXS3 571 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 PACSIN3Q9UKS6 424 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 TESMINQ9Y4I5 508 aa13.19□□□□□ -0.3
NCK1-202ENST00000460960 DSCAMO60469 2012 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 HCRTR2O43614 444 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 CBR3O75828 277 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 RCBTB2O95199 551 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 UBTFL6P0CB48 400 aaPredicted RBP13.18□□□□□ -0.3
NCK1-202ENST00000460960 T-ENOLP0DO92 83 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 UBL4AP11441 157 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 FPR1P21462 350 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 DPP4P27487 766 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 PGM1P36871 562 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 CLK3P49761 638 aaKnown RBP13.18□□□□□ -0.3
NCK1-202ENST00000460960 SLC7A2P52569 658 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 CRYBA2P53672 197 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 CRISP3P54108 245 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 SKP2Q13309 424 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 SCARB2Q14108 478 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 ACKR1Q16570 336 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 ENPP6Q6UWR7 440 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 ZNF836Q6ZNA1 936 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 P4HA3Q7Z4N8 544 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 FAM71CQ8NEG0 241 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 ZNF583Q96ND8 569 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 PIGMQ9H3S5 423 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 MTHFD2LQ9H903 347 aaPredicted RBP13.18□□□□□ -0.3
NCK1-202ENST00000460960 EFCAB1Q9HAE3 211 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 DKKL1Q9UK85 242 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 ICAM5Q9UMF0 924 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 CORO2BQ9UQ03 480 aa13.18□□□□□ -0.3
NCK1-202ENST00000460960 GTPBP1O00178 669 aaKnown RBP13.17□□□□□ -0.3
NCK1-202ENST00000460960 AP3D1O14617 1153 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 TPST1O60507 370 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 CYP7B1O75881 506 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 CSTAP01040 98 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 NPPAP01160 153 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 SRD5A2P31213 254 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
NCK1-202ENST00000460960 KCNJ10P78508 379 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 SLC25A3Q00325 362 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 FAM27E3Q08E93 113 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 MRPL2Q5T653 305 aaKnown RBP13.17□□□□□ -0.3
NCK1-202ENST00000460960 REEP3Q6NUK4 255 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 HACD2Q6Y1H2 254 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 SERPINA11Q86U17 422 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 CNEP1R1Q8N9A8 125 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 OR52P1PQ8NH57 321 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms