RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 NR5A2O00482 541 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 ADAMDEC1O15204 470 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 ZNF264O43296 627 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 TNFSF13O75888 250 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 CRHP06850 196 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 GPX2P18283 190 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 LOXP28300 417 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 CLDN20P56880 219 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 GUSBP1Q15486 140 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 GPR68Q15743 365 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 TOMM34Q15785 309 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 ADRM1Q16186 407 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 NDUFAF6Q330K2 333 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 C6orf10Q5SRN2 563 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 PRAMEF8Q5VWM4 474 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 PRAMEF7Q5VXH5 474 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 METTL25Q8N6Q8 603 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 OR5W2Q8NH69 310 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 PHOSPHO1Q8TCT1 267 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 CHMP6Q96FZ7 201 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 EXOSC3Q9NQT5 275 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 SAR1AQ9NR31 198 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 THUMPD1Q9NXG2 353 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 CARD8Q9Y2G2 431 aa12.22□□□□□ -0.45
SCAMP4-206ENST00000460767 CLDN24A6NM45 220 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 SHISA8B8ZZ34 492 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 H0YC42 278 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 FXYD1O00168 92 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 FBP2O00757 339 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 TLX2O43763 284 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 NUDT7P0C024 238 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 TROVE2P10155 538 aaKnown RBP eCLIP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 UBL4AP11441 157 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 PEPDP12955 493 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 HPGDP15428 266 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 PRKCAP17252 672 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 IL11P20809 199 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 ELK4P28324 431 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 GCKP35557 465 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 ANXA11P50995 505 aaKnown RBP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 TPD52P55327 224 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 DSTNP60981 165 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 COQ5Q5HYK3 327 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 RAET1LQ5VY80 246 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 HMBOX1Q6NT76 420 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 HIPK1Q86Z02 1210 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 CMIPQ8IY22 773 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 OR5M1Q8NGP8 315 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 SH3YL1Q96HL8 342 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 MRGPRX4Q96LA9 322 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 WFIKKN1Q96NZ8 548 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 CPPED1Q9BRF8 314 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 QRSL1Q9H0R6 528 aaKnown RBP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 MTHFD2LQ9H903 347 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 UBTD1Q9HAC8 227 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 A4GALTQ9NPC4 353 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 MRGBPQ9NV56 204 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 VDAC3Q9Y277 283 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 SLC35A3Q9Y2D2 325 aa12.21□□□□□ -0.45
SCAMP4-206ENST00000460767 H3BNH8 94 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 FAAHO00519 579 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 DYNC1I1O14576 645 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 TGM6O95932 706 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 CCKARP32238 428 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 EIF1P41567 113 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 RNF144AP50876 292 aaPredicted RBP12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 ARFIP2P53365 341 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 RAC1P63000 192 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 KCNJ10P78508 379 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 RUNDC3AQ59EK9 446 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 EIF3MQ7L2H7 374 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 GRAMD2AQ8IUY3 354 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 RNF145Q96MT1 663 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 TMEM38AQ9H6F2 299 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 FAM53CQ9NYF3 392 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 ELOVL5Q9NYP7 299 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 P2RX2Q9UBL9 471 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 NDUFAF1Q9Y375 327 aa12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 GPC6Q9Y625 555 aaPredicted RBP12.2□□□□□ -0.46
SCAMP4-206ENST00000460767 A0A1W2PNV4 684 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 CDHR4A6H8M9 788 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 SLC22A2O15244 555 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 CSTAP01040 98 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 THBS1P07996 1170 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 VIMP08670 466 aaKnown RBP12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 ARAFP10398 606 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 PPIBP23284 216 aaKnown RBP12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 CD79BP40259 229 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 FOXF1Q12946 379 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 KLF10Q13118 480 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 ETFDHQ16134 617 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 GPAT3Q53EU6 434 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 RNF220Q5VTB9 566 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 PLEKHM3Q6ZWE6 761 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 NET1Q7Z628 596 aaPredicted RBP12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 ST8SIA1Q92185 356 aa12.19□□□□□ -0.46
SCAMP4-206ENST00000460767 CNOT9Q92600 299 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms