RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 FBXW4P57775 412 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 VLDLRP98155 873 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PLAURQ03405 335 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 EFR3AQ14156 821 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ZMYND11Q15326 602 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 CRB2Q5IJ48 1285 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 TBCELQ5QJ74 424 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PDZK1Q5T2W1 519 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PLAG1Q6DJT9 500 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 APOOLQ6UXV4 268 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ARMC8Q8IUR7 673 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 AQP12AQ8IXF9 295 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 LINC00518Q8N0U6 118 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 CHDHQ8NE62 594 aaPredicted RBP9.47□□□□□ -0.89
USP39-210ENST00000459775 STMN2Q93045 179 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PYURFQ96I23 114 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 PKP2Q99959 881 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 KLHDC3Q9BQ90 382 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 SPXQ9BT56 116 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 CHID1Q9BWS9 393 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 DEFB126Q9BYW3 111 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 FAM192AQ9GZU8 254 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 CTPS2Q9NRF8 586 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 FAIMQ9NVQ4 179 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ANKRD10Q9NXR5 420 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 SEC14L3Q9UDX4 400 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 RPS6KA6Q9UK32 745 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 ABCG2Q9UNQ0 655 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 LIPT1Q9Y234 373 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 NTNG1Q9Y2I2 539 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 AP4S1Q9Y587 144 aa9.47□□□□□ -0.89
USP39-210ENST00000459775 DSPPQ9NZW4 1301 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 FRG2CA6NGY1 282 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 ARGFXA6NJG6 315 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 A6NL46 340 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 NUDT19A8MXV4 375 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 J3KTA2 159 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 SUV39H1O43463 412 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 UGT2B11O75310 529 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 SEMA7AO75326 666 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 FKBP6O75344 327 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 IFI6P09912 130 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 CPEP16870 476 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 NUP62P37198 522 aaPredicted RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 ANXA11P50995 505 aaKnown RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 IST1P53990 364 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 SELENOWP63302 87 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 HPCAP84074 193 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 ZNF468Q5VIY5 522 aaPredicted RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 BICRALQ6AI39 1079 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 HMBOX1Q6NT76 420 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 LRRC74BQ6ZQY2 392 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 EIF3MQ7L2H7 374 aaKnown RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 OR52P1PQ8NH57 321 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 SPPL2AQ8TCT8 520 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 OMA1Q96E52 524 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 C6orf62Q9GZU0 229 aaPredicted RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 MUC13Q9H3R2 512 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 BCL2L10Q9HD36 194 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 CCM2LQ9NUG4 571 aaPredicted RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 STX18Q9P2W9 335 aaKnown RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 MYOTQ9UBF9 498 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 ANAPC2Q9UJX6 822 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 KCND3Q9UK17 655 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 CNOT11Q9UKZ1 510 aaKnown RBP9.46□□□□□ -0.89
USP39-210ENST00000459775 PCDHGA6Q9Y5G7 932 aa9.46□□□□□ -0.89
USP39-210ENST00000459775 BET1O15155 118 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 ICOSLGO75144 302 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 ZFAND5O76080 213 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 NADKO95544 446 aaPredicted RBP9.46□□□□□ -0.9
USP39-210ENST00000459775 NTN1O95631 604 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 GKN3PP0CG01 181 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 PRG2P13727 222 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 CD82P27701 267 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 NR1H2P55055 460 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 PLCXD2Q0VAA5 305 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 LRRC36Q1X8D7 754 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 CMPK2Q5EBM0 449 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 ZNF311Q5JNZ3 666 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 BROXQ5VW32 411 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 ZNF836Q6ZNA1 936 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 TMEM200AQ86VY9 491 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 TPRA1Q86W33 373 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 BBS10Q8TAM1 723 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 BRIX1Q8TDN6 353 aaKnown RBP9.46□□□□□ -0.9
USP39-210ENST00000459775 KIAA1143Q96AT1 154 aaPredicted RBP9.46□□□□□ -0.9
USP39-210ENST00000459775 DOHHQ9BU89 302 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 KCNN2Q9H2S1 579 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 CDCP1Q9H5V8 836 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 MTHFD2LQ9H903 347 aaPredicted RBP9.46□□□□□ -0.9
USP39-210ENST00000459775 THUMPD1Q9NXG2 353 aaKnown RBP9.46□□□□□ -0.9
USP39-210ENST00000459775 RHCGQ9UBD6 479 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 ENOPH1Q9UHY7 261 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.9
USP39-210ENST00000459775 ASH1LQ9NR48 2969 aaKnown RBP9.45□□□□□ -0.9
USP39-210ENST00000459775 IGSF10Q6WRI0 2623 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 TRIM77I1YAP6 450 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 KLK10O43240 276 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms