RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 B2RBV5 119 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TMEM229AB2RXF0 380 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 FAM47E-STBD1D6RA91 191 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 H3BML4 177 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 AP3D1O14617 1153 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ADAMDEC1O15204 470 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TPST2O60704 377 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 LGI1O95970 557 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 OPN1LWP04000 364 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ESRRAP11474 423 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 PRG2P13727 222 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 POU3F2P20265 443 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 KDELR2P33947 212 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 PTGER4P35408 488 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 CPOXP36551 454 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 KCNJ5P48544 419 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 IDH2P48735 452 aaKnown RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 GSK3BP49841 420 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 MNAT1P51948 309 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF136P52737 540 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 EEFSECP57772 596 aaKnown RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ADORA2A-AS1P86434 159 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 PMPCAQ10713 525 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 CTU2Q2VPK5 515 aaKnown RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 INTS11Q5TA45 600 aaKnown RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TMEM211Q6ICI0 200 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 NCCRP1Q6ZVX7 275 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 PLEKHM3Q6ZWE6 761 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TRPM8Q7Z2W7 1104 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF550Q7Z398 422 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 GGNQ86UU5 652 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ADGRG3Q86Y34 549 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ARMC8Q8IUR7 673 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 MICU2Q8IYU8 434 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 PGAM4Q8N0Y7 254 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 LILRA2Q8N149 483 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 SMYD1Q8NB12 490 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 BHLHE22Q8NFJ8 381 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 GPR32P1Q8NGA4 272 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF563Q8TA94 476 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 PHF10Q8WUB8 498 aaKnown RBP9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TMEM234Q8WY98 164 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TAMM41Q96BW9 452 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 CCDC120Q96HB5 630 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ADGRG7Q96K78 797 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TUBA1CQ9BQE3 449 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 TTYH2Q9BSA4 534 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 PINK1Q9BXM7 581 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ALG2Q9H553 416 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 ARMC7Q9H6L4 198 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 CALHM2Q9HA72 323 aa9.05□□□□□ -0.96
ATG4A-206ENST00000457035 A0A0J9YW62 118 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 PRORSD1PA6NEY8 169 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CD8B2A6NJW9 211 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 SYT5O00445 386 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 FRS3O43559 492 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 ZG16O60844 167 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 TOXO94900 526 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 OPN1SWP03999 348 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 C8BP07358 591 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 GLI4P10075 376 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CD247P20963 164 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CALB2P22676 271 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 ELK4P28324 431 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 SHC1P29353 583 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 APOBEC1P41238 236 aaKnown RBP9.04□□□□□ -0.96
ATG4A-206ENST00000457035 SLC1A3P43003 542 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 NUP107P57740 925 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 HOXC5Q00444 222 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 MERTKQ12866 999 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 SF3B4Q15427 424 aaKnown RBP eCLIP9.04□□□□□ -0.962e-6■■■■■ 28.8
ATG4A-206ENST00000457035 TMEM176BQ3YBM2 270 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-206ENST00000457035 ACSF3Q4G176 576 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-206ENST00000457035 C1orf185Q5T7R7 199 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 NSUN5P2Q63ZY6 315 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 MTFR2Q6P444 385 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 RPTNQ6XPR3 784 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 B3GNT6Q6ZMB0 384 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 GRINAQ7Z429 371 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 UBQLNLQ8IYU4 475 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 EID3Q8N140 333 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 MEIOBQ8N635 442 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CDRT15Q96T59 188 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CACYBPQ9HB71 228 aaKnown RBP9.04□□□□□ -0.96
ATG4A-206ENST00000457035 SPAG4Q9NPE6 437 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CTPS2Q9NRF8 586 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 STOML1Q9UBI4 398 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CD300AQ9UGN4 299 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 OSGIN1Q9UJX0 560 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 PACSIN3Q9UKS6 424 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 PRR14LQ5THK1 2151 aa9.04□□□□□ -0.96
ATG4A-206ENST00000457035 CLCA1A8K7I4 914 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 H0Y3Z8 333 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 FESP07332 822 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 HTR1EP28566 365 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 TACR3P29371 465 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 CEACAM8P31997 349 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-206ENST00000457035 TIMP3P35625 211 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 HTR3AP46098 478 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 PER3P56645 1201 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms