RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 OR10Q1Q8NGQ4 319 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 WNT2BQ93097 391 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 TAMM41Q96BW9 452 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 KLHL15Q96M94 604 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 PSMG3-AS1Q96PY0 264 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 ADAM19Q9H013 955 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 CTPS2Q9NRF8 586 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 SERINC1Q9NRX5 453 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 COQ3Q9NZJ6 369 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 GMPR2Q9P2T1 348 aaKnown RBP25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 Q9UFV3 132 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 RNF6Q9Y252 685 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 GJE1A6NN92 205 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 FRS3O43559 492 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 OPN1SWP03999 348 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 SFTPDP35247 375 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 HTR3AP46098 478 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 KCNJ5P48544 419 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 C3orf33Q6P1S2 294 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 PLXDC2Q6UX71 529 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 ADGRG3Q86Y34 549 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 SMYD1Q8NB12 490 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 ZNF845Q96IR2 970 aaPredicted RBP25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 EVA1AQ9H8M9 152 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 TMEM181Q9P2C4 612 aa25.15■■□□□ 1.62
SMARCC1-203ENST00000454240 C8BP07358 591 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 ZNF136P52737 540 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 TMEM176BQ3YBM2 270 aaPredicted RBP25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 WBP2NLQ6ICG8 309 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 C9orf106Q8NAJ2 232 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 ATP6V1C2Q8NEY4 427 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 GPR32P1Q8NGA4 272 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 OR10D3Q8NH80 312 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 OR2V1Q8NHB1 315 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 SDCCAG3Q96C92 435 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 ALG2Q9H553 416 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 SPAG4Q9NPE6 437 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 PAQR5Q9NXK6 330 aaPredicted RBP25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 OSGIN1Q9UJX0 560 aa25.14■■□□□ 1.62
SMARCC1-203ENST00000454240 SYT5O00445 386 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 TNFSF11O14788 317 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 TGM6O95932 706 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 LGI1O95970 557 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 IL2RAP01589 272 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 CD247P20963 164 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 TACR3P29371 465 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 EIF1AXP47813 144 aaKnown RBP25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 GSK3BP49841 420 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 POLR2HP52434 150 aaKnown RBP25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 COPZ1P61923 177 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 CDSNQ15517 529 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 POMZP3Q6PJE2 187 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 CCDC71Q8IV32 467 aaPredicted RBP25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 ASB5Q8WWX0 329 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 NSL1Q96IY1 281 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 KLHL28Q9NXS3 571 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 CHRNA9Q9UGM1 479 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 ZNF175Q9Y473 711 aa25.13■■□□□ 1.61
SMARCC1-203ENST00000454240 SPTBN1Q01082 2364 aaKnown RBP25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 HSPB2A8KAH6 182 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 RCBTB2O95199 551 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 FKBP2P26885 142 aaKnown RBP25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 CHRNB4P30926 498 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 KDELR2P33947 212 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 MNAT1P51948 309 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 HOXC5Q00444 222 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 HSPB2Q16082 182 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 SGCBQ16585 318 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 PDSS1Q5T2R2 415 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 HBMQ6B0K9 141 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 PGAM4Q8N0Y7 254 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 NAXEQ8NCW5 288 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 SLC26A7Q8TE54 656 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 SLC25A43Q8WUT9 341 aaPredicted RBP25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 RASSF5Q8WWW0 418 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 FIG4Q92562 907 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 OSTF1Q92882 214 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 TM9SF2Q99805 663 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 WFDC6Q9BQY6 131 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 SLC13A4Q9UKG4 626 aa25.12■■□□□ 1.61
SMARCC1-203ENST00000454240 TMED7-TICAM2A0A0A6YYA0 188 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 SLC22A20A6NK97 555 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 CXCL13O43927 109 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 MAP2K6P52564 334 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 CARD18P57730 90 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 SLC25A3Q00325 362 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 PON3Q15166 354 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 CADM2Q8N3J6 435 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 LSMEM1Q8N8F7 131 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 LILRB4Q8NHJ6 448 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 ARHGDIGQ99819 225 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 COQ10BQ9H8M1 238 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 TMED7Q9Y3B3 224 aa25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 SPIN1Q9Y657 262 aaPredicted RBP25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 INTS1Q8N201 2190 aaKnown RBP25.11■■□□□ 1.61
SMARCC1-203ENST00000454240 ICE1Q9Y2F5 2266 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 MPDZO75970 2070 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 CLDN14O95500 239 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 CLDN1O95832 211 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 RGS8P57771 180 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms