RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 DUSP7Q16829 419 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 KLHL38Q2WGJ6 581 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 TRIM16LQ309B1 348 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 CARD16Q5EG05 197 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 RAET1LQ5VY80 246 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 TGIF2LXQ8IUE1 241 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 LRRC49Q8IUZ0 686 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 C9orf40Q8IXQ3 194 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 ABHD12Q8N2K0 398 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 ATP6V0D2Q8N8Y2 350 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 CSNK1G2-AS1Q8NCQ2 148 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 OR4F6Q8NGB9 312 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 NPRL2Q8WTW4 380 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 DNAJA4Q8WW22 397 aaPredicted RBP3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 ITLN1Q8WWA0 313 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF707Q96C28 371 aaPredicted RBP3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 TECTBQ96PL2 329 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 PANX2Q96RD6 677 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 IL4I1Q96RQ9 567 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 ATF6BQ99941 703 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 NAT10Q9H0A0 1025 aaKnown RBP3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 GEMIN7Q9H840 131 aaKnown RBP3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 CAB39LQ9H9S4 337 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 NMRAL1Q9HBL8 299 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 NT5MQ9NPB1 228 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 TUBG2Q9NRH3 451 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 DHRS4-AS1Q9P1J3 65 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 ARMCX1Q9P291 453 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 VANGL2Q9ULK5 521 aa3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 CHTOPQ9Y3Y2 248 aaKnown RBP3.3□□□□□ -1.88
HMGN3P1-201ENST00000453847 A0A1B0GUS0 222 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 A0A1B0GWB2 263 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF487B1APH4 448 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 E9PLD3 99 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 SULT2B1O00204 365 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 POLR2DO15514 142 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 AKR7A2O43488 359 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 OR10H3O60404 316 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 WBP4O75554 376 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 GPX5O75715 221 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 TMEM50AO95807 157 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 GNA14O95837 355 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 KRT14P02533 472 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF43P17038 809 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 GYG1P46976 350 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 DAP3P51398 398 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ERVK11-1P61568 191 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 RPS15P62841 145 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 MRPS11P82912 194 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 SPAG1Q07617 926 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 HADHQ16836 314 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 C2CD6Q53TS8 623 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 SPANXN2Q5MJ10 180 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 GPRC6AQ5T6X5 926 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 OR2G6Q5TZ20 316 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF343Q6P1L6 599 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF613Q6PF04 617 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 C19orf35Q6ZS72 473 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 TMCO2Q7Z6W1 182 aaPredicted RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 CATSPER3Q86XQ3 398 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 CCDC50Q8IVM0 306 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 SLC22A18ASQ8N1D0 253 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 BBOF1Q8ND07 529 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 BPIFCQ8NFQ6 507 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 SLC22A8Q8TCC7 542 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ACMSDQ8TDX5 336 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 MAIP1Q8WWC4 291 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 RANBP9Q96S59 729 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 CNN2Q99439 309 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 RNF2Q99496 336 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 MCHR1Q99705 422 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 CENPKQ9BS16 269 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 CHIAQ9BZP6 476 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZBP1Q9H171 429 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ADNPQ9H2P0 1102 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 PPA2Q9H2U2 334 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 SUDS3Q9H7L9 328 aaPredicted RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 NIPAL2Q9H841 368 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 GNB4Q9HAV0 340 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 SPRR3Q9UBC9 169 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 WARS2Q9UGM6 360 aaKnown RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 PHF11Q9UIL8 331 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ZNF580Q9UK33 172 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 PACSIN2Q9UNF0 486 aaPredicted RBP3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 TNFRSF18Q9Y5U5 241 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 PEX16Q9Y5Y5 336 aa3.29□□□□□ -1.88
HMGN3P1-201ENST00000453847 ANKRD30BQ9BXX2 1392 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 TNIKQ9UKE5 1360 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 ARPC4-TTLL3A0A0A6YYG9 625 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 A0A1B0GTH9 108 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 A0A1B0GTQ1 180 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 A0A1B0GU03 582 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 TCRBV9S1A1TA0A576 114 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 SHISA9B4DS77 424 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 TRDCB7Z8K6 153 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 PRSS44E7EML9 344 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 KIF2AO00139 706 aaPredicted RBP3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 UGT2B17O75795 530 aa3.28□□□□□ -1.88
HMGN3P1-201ENST00000453847 OR2F2O95006 317 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms