RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 CCT3P49368 545 aaKnown RBP11.33□□□□□ -0.6
PTPA-224ENST00000453358 PDLIM4P50479 330 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 SESN3P58005 492 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 CSNK2A1P68400 391 aaPredicted RBP11.33□□□□□ -0.6
PTPA-224ENST00000453358 SKP2Q13309 424 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 TP53BP2Q13625 1128 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 GABRA6Q16445 453 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 SWI5Q1ZZU3 235 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 SYT14P1Q58G82 188 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 PDZK1Q5T2W1 519 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 OR7E24Q6IFN5 339 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 RNF165Q6ZSG1 346 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 R3HCC1LQ7Z5L2 792 aaKnown RBP11.33□□□□□ -0.6
PTPA-224ENST00000453358 MTDHQ86UE4 582 aaKnown RBP11.33□□□□□ -0.6
PTPA-224ENST00000453358 OR7A2PQ8NGA2 310 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 PSMA8Q8TAA3 256 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 THUMPD3Q9BV44 507 aaKnown RBP11.33□□□□□ -0.6
PTPA-224ENST00000453358 TUBB1Q9H4B7 451 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 FKRPQ9H9S5 495 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 ASB6Q9NWX5 421 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 FAF1Q9UNN5 650 aaPredicted RBP11.33□□□□□ -0.6
PTPA-224ENST00000453358 TMED5Q9Y3A6 229 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 PMF1-BGLAPU3KQ54 211 aa11.33□□□□□ -0.6
PTPA-224ENST00000453358 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
PTPA-224ENST00000453358 SERINC4A6NH21 518 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 PDLIM1O00151 329 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 NDUFS8O00217 210 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 AZIN1O14977 448 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 LSM1O15116 133 aaKnown RBP11.32□□□□□ -0.6
PTPA-224ENST00000453358 SCAMP2O15127 329 aaKnown RBP11.32□□□□□ -0.6
PTPA-224ENST00000453358 GLRA3O75311 464 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 KRT16P08779 473 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 LAMP1P11279 417 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 BCKDHAP12694 445 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 APEHP13798 732 aaKnown RBP11.32□□□□□ -0.6
PTPA-224ENST00000453358 HNF1AP20823 631 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 APOBEC3AP31941 199 aaPredicted RBP11.32□□□□□ -0.6
PTPA-224ENST00000453358 PHC1P78364 1004 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 SLC25A3Q00325 362 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 MERTKQ12866 999 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 SQLEQ14534 574 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 MST1LQ2TV78 715 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 LIPNQ5VXI9 398 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 LIPMQ5VYY2 423 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
PTPA-224ENST00000453358 OR56A1Q8NGH5 318 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 SLC25A43Q8WUT9 341 aaPredicted RBP11.32□□□□□ -0.6
PTPA-224ENST00000453358 OR5P2Q8WZ92 322 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 SORCS2Q96PQ0 1159 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 SDF2Q99470 211 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 PIMREGQ9BSJ6 248 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 SERINC1Q9NRX5 453 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 ACER3Q9NUN7 267 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 OXSMQ9NWU1 459 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 PSMC3IPQ9P2W1 217 aaPredicted RBP11.32□□□□□ -0.6
PTPA-224ENST00000453358 KCNE5Q9UJ90 142 aa11.32□□□□□ -0.6
PTPA-224ENST00000453358 NUP214P35658 2090 aaPredicted RBP11.31□□□□□ -0.6
PTPA-224ENST00000453358 CENPVL1A0A0U1RR11 272 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 A0A1W2PPM1 405 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 ATP6V1G2-DDX39BF2Z307 99 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 GPR171O14626 319 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 RIPK2O43353 540 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 PLIN3O60664 434 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 CYP7B1O75881 506 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 C6orf47O95873 294 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 LINC00032P0C843 101 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 DDX5P17844 614 aaKnown RBP11.31□□□□□ -0.6
PTPA-224ENST00000453358 HPCAL1P37235 193 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 SLC16A1P53985 500 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 GALNTL6Q49A17 601 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 C1orf162Q8NEQ5 155 aaPredicted RBP11.31□□□□□ -0.6
PTPA-224ENST00000453358 OR52E4Q8NGH9 312 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 OR5D16Q8NGK9 328 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 PIGXQ8TBF5 258 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 SFXN5Q8TD22 340 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 TMEM234Q8WY98 164 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 C3orf49Q96BT1 292 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 FOXN4Q96NZ1 517 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 OR7D2Q96RA2 312 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 TRMOQ9BU70 441 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 NMUR2Q9GZQ4 415 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 SLC17A5Q9NRA2 495 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 FIS1Q9Y3D6 152 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 FKBP7Q9Y680 259 aa11.31□□□□□ -0.6
PTPA-224ENST00000453358 MGAM2Q2M2H8 2515 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 WIPF1O43516 503 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 KIAA0513O60268 411 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
PTPA-224ENST00000453358 URI1O94763 535 aaPredicted RBP11.3□□□□□ -0.6
PTPA-224ENST00000453358 PMS2P2O95744 297 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 TGFAP01135 160 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 TFPIP10646 304 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 RUNX1T1Q06455 604 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 ZNF141Q15928 474 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 CR1LQ2VPA4 569 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 SPDYE7PQ495Y7 208 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 C9orf135Q5VTT2 229 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms