RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 IGHV4-61A0A0C4DH41 118 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 LMO7DNF2Z398 122 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 UBXN8O00124 270 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 BMPR1BO00238 502 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 KPNA3O00505 521 aaPredicted RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 IGLV2-11P01706 119 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 IGHV4-59P01825 116 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 OPN1MWP04001 364 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 APRTP07741 180 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 OPN1MW2P0DN77 364 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 OPN1MW3P0DN78 364 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 PRKAR1AP10644 381 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SLC2A2P11168 524 aaPredicted RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 RPA2P15927 270 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 RPL35AP18077 110 aaKnown RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 TSPAN8P19075 237 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 GLRA1P23415 457 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 DCTP40126 519 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SOX3P41225 446 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 RPL34P49207 117 aaKnown RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SULT1E1P49888 294 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 PLK1P53350 603 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 CDH4P55283 916 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SEMG2Q02383 582 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 MFGE8Q08431 387 aaPredicted RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 IL24Q13007 206 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 DNAJC3Q13217 504 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 NFATC2Q13469 925 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 RIPK1Q13546 671 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SLC36A3Q495N2 470 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 CFAP157Q5JU67 520 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 BRMS1LQ5PSV4 323 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 CCDC183Q5T5S1 534 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 HES3Q5TGS1 186 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 LEKR1Q6ZMV7 388 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 C9orf139Q6ZV77 190 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 FAM183BPQ6ZVS7 135 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 USP43Q70EL4 1123 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 Q71RC1 249 aaPredicted RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 VASH2Q86V25 355 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SLC22A16Q86VW1 577 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 TRIM69Q86WT6 500 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 MARCH9Q86YJ5 346 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 TMEM35BQ8NCS4 154 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 TRIM58Q8NG06 486 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 TMEM37Q8WXS4 190 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 CNDP1Q96KN2 507 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 C2orf48Q96LS8 159 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 NODALQ96S42 347 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 CPXM1Q96SM3 734 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 KRT12Q99456 494 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 FEM1AQ9BSK4 669 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 ANP32EQ9BTT0 268 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 MRPL13Q9BYD1 178 aaKnown RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 POLR1EQ9GZS1 481 aaKnown RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 S100A14Q9HCY8 104 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SIX2Q9NPC8 291 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 P2RX2Q9UBL9 471 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 EPHA6Q9UF33 1036 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 BCAP29Q9UHQ4 241 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 CYTH4Q9UIA0 394 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 RWDD2AQ9UIY3 292 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 SLCO1B1Q9Y6L6 691 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 DSPP15924 2871 aaKnown RBP3.73□□□□□ -1.81
LINC00393-202ENST00000452852 EPG5Q9HCE0 2579 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ATMQ13315 3056 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SMG1Q96Q15 3661 aaKnown RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SDHDO14521 159 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SH2D1BO14796 132 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SIGLEC5O15389 551 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SLC31A1O15431 190 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 LATO43561 262 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SDC3O75056 442 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ADCY5O95622 1261 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 HPRP00739 348 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 RPS2P15880 293 aaKnown RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 AMD1P17707 334 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 AADACP22760 399 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 OR1E1P30953 314 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 DRD3P35462 400 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 TAGLN2P37802 199 aaKnown RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 FEN1P39748 380 aaKnown RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ALDH3B1P43353 468 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 OR3A2P47893 321 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ACADVLP49748 655 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 DUSP3P51452 185 aaPredicted RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 XGP55808 180 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 RPS4XP62701 263 aaKnown RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 RPS21P63220 83 aaKnown RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ARL16Q0P5N6 197 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 HSPA14Q0VDF9 509 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 MEF2DQ14814 521 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SYCP1Q15431 976 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 CAMK4Q16566 473 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 PDK4Q16654 411 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ANKRD55Q3KP44 614 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 FAM106AQ4KMX7 169 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 BOLA3Q53S33 107 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 DCAF12Q5T6F0 453 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 FBXL22Q6P050 247 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms