RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 DCHS2Q6V1P9 2916 aa10.68□□□□□ -0.7
LSP1P3-201ENST00000449530 IGHV3-15A0A0B4J1V0 119 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 TUBAL3A6NHL2 446 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 SS18L1O75177 396 aaPredicted RBP10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 BMP2P12643 396 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 UQCRBP14927 111 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 PPIBP23284 216 aaKnown RBP10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 IDH2P48735 452 aaKnown RBP10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 ARFIP2P53365 341 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 CTBP2P56545 445 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 SORDQ00796 357 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 FAM214BQ7L5A3 538 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 GRINAQ7Z429 371 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 NFKBIDQ8NI38 313 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 RNF128Q8TEB7 428 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 ABHD3Q8WU67 409 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 PMM1Q92871 262 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 REXO5Q96IC2 774 aaKnown RBP10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 GMPPAQ96IJ6 420 aaPredicted RBP10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 CPPED1Q9BRF8 314 aaPredicted RBP10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 CCDC106Q9BWC9 280 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 CTPS2Q9NRF8 586 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 SERINC1Q9NRX5 453 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 RLIMQ9NVW2 624 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 CORO2BQ9UQ03 480 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 CSMD2Q7Z408 3487 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 PDZD2O15018 2839 aa10.67□□□□□ -0.7
LSP1P3-201ENST00000449530 A0A0G2JPF8 293 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 CDHR4A6H8M9 788 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 CFAP73A6NFT4 308 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 A8MXE2 369 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 EVPLLA8MZ36 301 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 HNRNPCL2B2RXH8 293 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 HNRNPCL3B7ZW38 293 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 HNRNPCL1O60812 293 aaKnown RBP10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 THBS1P07996 1170 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 GKN3PP0CG01 181 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 HNRNPCL4P0DMR1 293 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 ARAFP10398 606 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 TFPIP10646 304 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 CCNA2P20248 432 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 AGTR1P30556 359 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 KCNJ5P48544 419 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 EPS8Q12929 822 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 NFYCQ13952 458 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 LARS2Q15031 903 aaKnown RBP10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 SYT14P1Q58G82 188 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 RNF220Q5VTB9 566 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 METTL21CQ5VZV1 264 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 ZNF474Q6S9Z5 364 aaPredicted RBP10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 DLEU7Q6UYE1 221 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 FCRLAQ7L513 359 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 RETREG3Q86VR2 466 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 ZNF440Q8IYI8 595 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 OR6K3Q8NGY3 331 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 BBS10Q8TAM1 723 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 LINC01560Q8TB33 94 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 FAM222BQ8WU58 562 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 SLC25A43Q8WUT9 341 aaPredicted RBP10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 DNAJA3Q96EY1 480 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 CCDC134Q9H6E4 229 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 BCL2L10Q9HD36 194 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 CHRNA9Q9UGM1 479 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 NDUFAF1Q9Y375 327 aa10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 SPIN1Q9Y657 262 aaPredicted RBP10.66□□□□□ -0.7
LSP1P3-201ENST00000449530 CGAP01215 116 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 FESP07332 822 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 PABPC4LP0CB38 370 aaKnown RBP10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 CD8BP10966 210 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 POU2F1P14859 743 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 KLK2P20151 261 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 ENPP1P22413 925 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 TACR3P29371 465 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 CCKARP32238 428 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 MDH1P40925 334 aaKnown RBP10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 APOBEC1P41238 236 aaKnown RBP10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 DIO1P49895 249 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 POLR2HP52434 150 aaKnown RBP10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 MTPNP58546 118 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 CDK6Q00534 326 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 SELPLGQ14242 412 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 RNPS1Q15287 305 aaKnown RBP10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 EXOC3L2Q2M3D2 409 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 ZNF311Q5JNZ3 666 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 PRAMEF8Q5VWM4 474 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 PRAMEF7Q5VXH5 474 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 SERPINA11Q86U17 422 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 CLIP4Q8N3C7 705 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 CADM2Q8N3J6 435 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 DPP10Q8N608 796 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 ZNF610Q8N9Z0 462 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 GPATCH1Q9BRR8 931 aaKnown RBP10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 SPATA9Q9BWV2 254 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 OR11A1Q9GZK7 315 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 C12orf49Q9H741 205 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 GLRX2Q9NS18 164 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 KLHL13Q9P2N7 655 aa10.65□□□□□ -0.7
LSP1P3-201ENST00000449530 MPDZO75970 2070 aa10.64□□□□□ -0.71
LSP1P3-201ENST00000449530 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
LSP1P3-201ENST00000449530 TMEM72A0PK05 275 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms