RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TMEM255A	Q5JRV8	349 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	TMEM201	Q5SNT2	666 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	CRIPAK	Q8N1N5	446 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	THAP4	Q8WY91	577 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	SDHAF3	Q9NRP4	125 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	KLK11	Q9UBX7	282 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	ADAM18	Q9Y3Q7	739 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	TRDV1	A0A1B0GX56	115 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	TCRB	P04435	133 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	ZGLP1	P0C6A0	271 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	NDUFV2	P19404	249 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	CSNK2A2	P19784	350 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	ADH7	P40394	386 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	OMP	P47874	163 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	TSPAN5	P62079	268 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	FLI1	Q01543	452 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	MLF2	Q15773	248 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	TEX261	Q6UWH6	196 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	ZAR1	Q86SH2	424 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	OR2L2	Q8NH16	312 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	TSSK2	Q96PF2	358 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	ACTR6	Q9GZN1	396 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	KCNK15	Q9H427	330 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	ACTR10	Q9NZ32	417 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	APOBEC3B	Q9UH17	382 aa	Known RBP	11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	ACSL5	Q9ULC5	683 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312		U3KQ87	197 aa		11.63	□□□□□ -0.55
DDR1-238	ENST00000446312	PRR23D1	E9PI22	279 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	APOC3	P02656	99 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ADH5	P11766	374 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	SELL	P14151	372 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ATF1	P18846	271 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	NT5E	P21589	574 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	PITPNB	P48739	271 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	KIAA1024L	P59773	190 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	TSPAN31	Q12999	210 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	EXOSC2	Q13868	293 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ZNF234	Q14588	700 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	DUSP5	Q16690	384 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312		Q6ZTK2	550 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	C10orf53	Q8N6V4	93 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	FAM174A	Q8TBP5	190 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	PTP4A1	Q93096	173 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	TNFRSF13C	Q96RJ3	184 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	BABAM2	Q9NXR7	383 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ING1	Q9UK53	422 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ZNF780B	Q9Y6R6	833 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	DENND4C	Q5VZ89	1909 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	LOC100509620	A0A075B734	347 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	HCN1	O60741	890 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	RFPL3	O75679	317 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	RGS9	O75916	674 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ZNF888	P0CJ79	500 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	TRAPPC2	P0DI81	140 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	TRAPPC2B	P0DI82	140 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ANXA7	P20073	488 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	NPR2	P20594	1047 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	CAPZA1	P52907	286 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	SST	P61278	116 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	SNTB2	Q13425	540 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	DEFB110	Q30KQ9	67 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	C2orf27A	Q580R0	203 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	NHLRC1	Q6VVB1	395 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	METTL27	Q8N6F8	245 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	OR52E2	Q8NGJ4	325 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	OR8D1	Q8WZ84	308 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	SUSD6	Q92537	303 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	LRIG1	Q96JA1	1093 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	FUZ	Q9BT04	418 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	BTBD1	Q9H0C5	482 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	NIPAL2	Q9H841	368 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ZNF69	Q9UC07	566 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	FAM186A	A6NE01	2351 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	TDRD6	O60522	2096 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312		A0A1W2PPV9	198 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	TCRBV16S1A1N1	A0A5B0	115 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	TMEM129	A0AVI4	362 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312		H0Y8X5	98 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312		H7C1C5	153 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	QSOX1	O00391	747 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	MAN2B1	O00754	1011 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ARPC1B	O15143	372 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	MOSPD3	O75425	235 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	MPC2	O95563	127 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	RLN1	P04808	185 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ADH1A	P07327	375 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	RD3L	P0DJH9	198 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	HIST1H1T	P22492	207 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	RPL4	P36578	427 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	HOXA1	P49639	335 aa	Predicted RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	ANXA11	P50995	505 aa	Known RBP	11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	CCR4	P51679	360 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	PER3	P56645	1201 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	HSD17B7	P56937	341 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	LCN6	P62502	163 aa		11.62	□□□□□ -0.55
DDR1-238	ENST00000446312	SQSTM1	Q13501	440 aa		11.62	□□□□□ -0.55

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