RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 GRIK2Q13002 908 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TRAF3Q13114 568 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 BIKQ13323 160 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 NFATC2Q13469 925 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 ZNF268Q14587 947 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 KPNB1Q14974 876 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 IRF4Q15306 451 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TRIP13Q15645 432 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 KCNJ8Q15842 424 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 PSMD5Q16401 504 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 DGUOKQ16854 277 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TCTN1Q2MV58 587 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 CDNFQ49AH0 187 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 EIPR1Q53HC9 387 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SLC35D3Q5M8T2 416 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TSTD2Q5T7W7 516 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 NT5DC1Q5TFE4 455 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 FAM69BQ5VUD6 431 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 HLA-DQA1Q5Y7H0 255 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 KCTD16Q68DU8 428 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TMEM200BQ69YZ2 307 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 C22orf42Q6IC83 251 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 ZNF770Q6IQ21 691 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 ZNF774Q6NX45 483 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SMARCD3Q6STE5 483 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TMPRSS11FQ6ZWK6 438 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR2W3Q7Z3T1 314 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 GRINAQ7Z429 371 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TMEM144Q7Z5S9 345 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 CTU1Q7Z7A3 348 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 WFDC3Q8IUB2 231 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 FAM126BQ8IXS8 530 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 ZC3H3Q8IXZ2 948 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 LILRA3Q8N6C8 439 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 CDRT4Q8N9R6 151 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 LRRC75AQ8NAA5 344 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR2AK2Q8NG84 335 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR4F15Q8NGB8 312 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR2AP1Q8NGE2 309 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR56A1Q8NGH5 318 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR52L2PQ8NGH6 319 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR52H1Q8NGJ2 320 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR4D5Q8NGN0 318 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR13D1Q8NGV5 346 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 OR14K1Q8NGZ2 314 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 LNX1Q8TBB1 728 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 ZNF398Q8TD17 642 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TMEM171Q8WVE6 324 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 NUDCD2Q8WVJ2 157 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 RGP1Q92546 391 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 NR4A3Q92570 626 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 EXOSC8Q96B26 276 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 TLCD1Q96CP7 247 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 RAB39BQ96DA2 213 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 FAM89AQ96GI7 184 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 DCAF5Q96JK2 942 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 MAGEB18Q96M61 343 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SDHCQ99643 169 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 ECSITQ9BQ95 431 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 EBF4Q9BQW3 602 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 ZSWIM1Q9BR11 485 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SOX7Q9BT81 388 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 NDUFAF3Q9BU61 184 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 IFT27Q9BW83 186 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 CADM1Q9BY67 442 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 DUSP16Q9BY84 665 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 COMMD4Q9H0A8 199 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TLNRD1Q9H1K6 362 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 ARV1Q9H2C2 271 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SEMA6CQ9H3T2 930 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 MFSD1Q9H3U5 465 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 UGT1A8Q9HAW9 530 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 C6orf50Q9HD87 102 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 RAB18Q9NP72 206 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 PRSS16Q9NQE7 514 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SIRT7Q9NRC8 400 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 GSKIPQ9P0R6 139 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 RWDD2AQ9UIY3 292 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 RNF150Q9ULK6 438 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 ABT1Q9ULW3 272 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 TFR2Q9UP52 801 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SLC7A11Q9UPY5 501 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 ANGPT4Q9Y264 503 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 FARSAQ9Y285 508 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 ARHGEF10O15013 1369 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 TONSLQ96HA7 1378 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 JCADQ9P266 1359 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 CCDC144AA2RUR9 1427 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 SMG6Q86US8 1419 aaKnown RBP2.56□□□□□ -2
UBBP3-201ENST00000445497 RB1CC1Q8TDY2 1594 aa2.56□□□□□ -2
UBBP3-201ENST00000445497 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 TRBV9A0A0B4J1U6 114 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 LOC100289279A0A1B0GTE1 492 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 A0A1B0GV90 55 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 C1orf226A1L170 272 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 OR6C68A6NDL8 312 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 ANKUB1A6NFN9 424 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 VSTM2BA6NLU5 285 aa2.55□□□□□ -2
UBBP3-201ENST00000445497 RNF212BA8MTL3 300 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms