RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 PLSCR4Q9NRQ2 329 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 VAPAQ9P0L0 249 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 LEF1Q9UJU2 399 aaPredicted RBP16.66■□□□□ 0.26
CCDC188-202ENST00000444532 PROCRQ9UNN8 238 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 CORO2BQ9UQ03 480 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 SPIN1Q9Y657 262 aaPredicted RBP16.66■□□□□ 0.26
CCDC188-202ENST00000444532 ANKHD1Q8IWZ3 2542 aaKnown RBP16.65■□□□□ 0.26
CCDC188-202ENST00000444532 TRBV5-3A0A0A0MS03 114 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 THBS1P07996 1170 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 UQCRBP14927 111 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 CPOXP36551 454 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 CD79BP40259 229 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 IDH2P48735 452 aaKnown RBP16.65■□□□□ 0.26
CCDC188-202ENST00000444532 LARS2Q15031 903 aaKnown RBP16.65■□□□□ 0.26
CCDC188-202ENST00000444532 ZNF474Q6S9Z5 364 aaPredicted RBP16.65■□□□□ 0.26
CCDC188-202ENST00000444532 TMEM200AQ86VY9 491 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 VRK2Q86Y07 508 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 SLC43A2Q8N370 569 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 ZNF610Q8N9Z0 462 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 LINC01560Q8TB33 94 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 RNF128Q8TEB7 428 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 DACH2Q96NX9 599 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 OPN3Q9H1Y3 402 aaPredicted RBP16.65■□□□□ 0.26
CCDC188-202ENST00000444532 ARMC7Q9H6L4 198 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 CACYBPQ9HB71 228 aaKnown RBP16.65■□□□□ 0.26
CCDC188-202ENST00000444532 GP6Q9HCN6 339 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 CTPS2Q9NRF8 586 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 MRGBPQ9NV56 204 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 CHRNA9Q9UGM1 479 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 NDRG3Q9UGV2 375 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 CLEC4AQ9UMR7 237 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 IFT52Q9Y366 437 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 NDUFAF1Q9Y375 327 aa16.65■□□□□ 0.26
CCDC188-202ENST00000444532 A0A1W2PNR3 127 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 FAM221AA4D161 298 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 CDHR4A6H8M9 788 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 CFAP73A6NFT4 308 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 A6NNC1 897 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 EVPLLA8MZ36 301 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 ADAM11O75078 769 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 CTAG2O75638 210 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 PRKD3O94806 890 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 GOSR1O95249 250 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 NUDT7P0C024 238 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 CD1EP15812 388 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 GPX2P18283 190 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 CLK1P49759 484 aaKnown RBP16.64■□□□□ 0.25
CCDC188-202ENST00000444532 FAM27E3Q08E93 113 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 SYT14P1Q58G82 188 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 RNF220Q5VTB9 566 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 DLEU7Q6UYE1 221 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 FCRLAQ7L513 359 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 ADGRG3Q86Y34 549 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 DPP10Q8N608 796 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 BBS10Q8TAM1 723 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 OR5B2Q96R09 309 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 TMEM120AQ9BXJ8 343 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 CCDC134Q9H6E4 229 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 FGFR1OP2Q9NVK5 253 aa16.64■□□□□ 0.25
CCDC188-202ENST00000444532 ZNF443Q9Y2A4 671 aaPredicted RBP16.64■□□□□ 0.25
CCDC188-202ENST00000444532 MPDZO75970 2070 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 C5orf58C9J3I9 102 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 DYNC1I1O14576 645 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 AP3D1O14617 1153 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 ANGPT2O15123 496 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 PGM3O95394 542 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 VIMP08670 466 aaKnown RBP16.63■□□□□ 0.25
CCDC188-202ENST00000444532 POU2F1P14859 743 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 ETS2P15036 469 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 AGTR1P30556 359 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 SLC1A3P43003 542 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 KCNJ5P48544 419 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 POLR2HP52434 150 aaKnown RBP16.63■□□□□ 0.25
CCDC188-202ENST00000444532 MAP2K6P52564 334 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 CSNK2A1P68400 391 aaPredicted RBP16.63■□□□□ 0.25
CCDC188-202ENST00000444532 GUCY1A3Q02108 690 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 EPS8Q12929 822 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 RPS26P11Q5JNZ5 115 aaPredicted RBP16.63■□□□□ 0.25
CCDC188-202ENST00000444532 ZNF836Q6ZNA1 936 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 TMPPEQ6ZT21 453 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 MAL2Q969L2 176 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 TACO1Q9BSH4 297 aaKnown RBP16.63■□□□□ 0.25
CCDC188-202ENST00000444532 SPATA9Q9BWV2 254 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 RASSF1Q9NS23 344 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 RLIMQ9NVW2 624 aa16.63■□□□□ 0.25
CCDC188-202ENST00000444532 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.63■□□□□ 0.25
CCDC188-202ENST00000444532 SH3D21A4FU49 640 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 SULT2B1O00204 365 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 ARAFP10398 606 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 TFPIP10646 304 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 ENPP1P22413 925 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 DIO1P49895 249 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 ARFIP2P53365 341 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 RUNDC3AQ59EK9 446 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 ZNF311Q5JNZ3 666 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 TMEM201Q5SNT2 666 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 GCNT6Q5T4J0 391 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 REEP3Q6NUK4 255 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 ZNF550Q7Z398 422 aa16.62■□□□□ 0.25
CCDC188-202ENST00000444532 STK32CQ86UX6 486 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms