RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 AKAP6Q13023 2319 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 CLDN24A6NM45 220 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 YES1P07947 543 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 CRYGSP22914 178 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 CRATP43155 626 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 CRISP3P54108 245 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 DSTNP60981 165 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 CSNK2A1P68400 391 aaPredicted RBP16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 MAPK11Q15759 364 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 ZSWIM7Q19AV6 140 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 SYT14P1Q58G82 188 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 BLOC1S3Q6QNY0 202 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 TMPPEQ6ZT21 453 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 PEX5LQ8IYB4 626 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 SLC38A5Q8WUX1 472 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 WDR60Q8WVS4 1066 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 CKAP2Q8WWK9 683 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 MAGEB18Q96M61 343 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 EBF4Q9BQW3 602 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 RAD21L1Q9H4I0 556 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 BCO1Q9HAY6 547 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 KLHL28Q9NXS3 571 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 KLHL9Q9P2J3 617 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 CHRNA9Q9UGM1 479 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 GMEB1Q9Y692 573 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 F8P00451 2351 aa16.79■□□□□ 0.28
ATPAF2-201ENST00000444058 A0A1W2PNR3 127 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 TMEM247A6NEH6 219 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 DNPH1O43598 174 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 UQCRBP14927 111 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 ENPP1P22413 925 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 DNASE1P24855 282 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 RYKP34925 604 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 ATP4BP51164 291 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 ART1P52961 327 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 FADDQ13158 208 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 PAMR1Q6UXH9 720 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 FUNDC1Q8IVP5 155 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 TUSC5Q8IXB3 177 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 ZNF440Q8IYI8 595 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 CNOT9Q92600 299 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 MBD6Q96DN6 1003 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 OR5B2Q96R09 309 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 PAIP1Q9H074 479 aaKnown RBP16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 CXXC4Q9H2H0 198 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 LIME1Q9H400 295 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 GPR52Q9Y2T5 361 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 PCDHB14Q9Y5E9 798 aa16.78■□□□□ 0.28
ATPAF2-201ENST00000444058 A0A096LPI6 279 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 A0A0G2JPF8 293 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 CDHR4A6H8M9 788 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 CFAP73A6NFT4 308 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HNRNPCL2B2RXH8 293 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HNRNPCL3B7ZW38 293 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 CYTIPO60759 359 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HNRNPCL1O60812 293 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 ADAM11O75078 769 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HNRNPCL4P0DMR1 293 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 BMP2P12643 396 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 ETFAP13804 333 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HOXB9P17482 250 aaPredicted RBP16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 PSMB1P20618 241 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 IDH2P48735 452 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 DIO1P49895 249 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 RGNQ15493 299 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 EXOC3L2Q2M3D2 409 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 GTDC1Q4AE62 458 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 LRIF1Q5T3J3 769 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 MRPL2Q5T653 305 aaKnown RBP16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 PRAMEF8Q5VWM4 474 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 PRAMEF7Q5VXH5 474 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 STAC2Q6ZMT1 411 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HMGN2P46Q86SG4 172 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 ADGRG3Q86Y34 549 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 AURKBQ96GD4 344 aaPredicted RBP16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 PSD2Q9BQI7 771 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 SIKE1Q9BRV8 207 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HDHD5Q9BXW7 423 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 KLHL4Q9C0H6 718 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 RABEP2Q9H5N1 569 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 CTPS2Q9NRF8 586 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HDGFL3Q9Y3E1 203 aa16.77■□□□□ 0.28
ATPAF2-201ENST00000444058 HRNRQ86YZ3 2850 aaPredicted RBP16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 ZNF724A8MTY0 619 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 DEFB108AA8MXU0 73 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 SULT2B1O00204 365 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 CLIC1O00299 241 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 SMAD9O15198 467 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 ZNF208O43345 1280 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 PMS2P2O95744 297 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 RAF1P04049 648 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 THBS1P07996 1170 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 SLC1A3P43003 542 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 PDK3Q15120 406 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 LIN52Q52LA3 116 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 RNF220Q5VTB9 566 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 SLC2A7Q6PXP3 512 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 TFAP2EQ6VUC0 442 aa16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 MTDHQ86UE4 582 aaKnown RBP16.76■□□□□ 0.27
ATPAF2-201ENST00000444058 GABRG1Q8N1C3 465 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms