RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TRMOQ9BU70 441 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 BPESC1Q9GZL8 116 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 QRSL1Q9H0R6 528 aaKnown RBP12.58□□□□□ -0.4
HMGN1-208ENST00000443046 SLC17A5Q9NRA2 495 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 ZCCHC3Q9NUD5 404 aaKnown RBP12.58□□□□□ -0.4
HMGN1-208ENST00000443046 C1orf109Q9NX04 203 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 DCTN4Q9UJW0 460 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 SULT2B1O00204 365 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 AKAP10O43572 662 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 URI1O94763 535 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-208ENST00000443046 GIFP27352 417 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 SKP2Q13309 424 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 FAM174BQ3ZCQ3 159 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 SYT14P1Q58G82 188 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 OR52E4Q8NGH9 312 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 PSMA8Q8TAA3 256 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 JADE3Q92613 823 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 HPS1Q92902 700 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 MTERF3Q96E29 417 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 FBXO17Q96EF6 278 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 BOD1Q96IK1 185 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 LAT2Q9GZY6 243 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 GPATCH2Q9NW75 528 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 SH3BP4Q9P0V3 963 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 TMEFF2Q9UIK5 374 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-208ENST00000443046 AMDHD2Q9Y303 409 aa12.57□□□□□ -0.4
HMGN1-208ENST00000443046 G3V2L1 256 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 GPR171O14626 319 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 MRPL33O75394 65 aaKnown RBP12.56□□□□□ -0.4
HMGN1-208ENST00000443046 TACSTD2P09758 323 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 UROSP10746 265 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 UBL4AP11441 157 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 EFNA1P20827 205 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-208ENST00000443046 SESN3P58005 492 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 NAA20P61599 178 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 H3F3AP84243 136 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 IQCCQ4KMZ1 466 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 DEF8Q6ZN54 512 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 FRMD7Q6ZUT3 714 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 CCNYL1Q8N7R7 359 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 ANKS4BQ8N8V4 417 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 SEMA6DQ8NFY4 1073 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 OR2T11Q8NH01 316 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 SLC25A43Q8WUT9 341 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-208ENST00000443046 TSSK3Q96PN8 268 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 THUMPD3Q9BV44 507 aaKnown RBP12.56□□□□□ -0.4
HMGN1-208ENST00000443046 ACTRT3Q9BYD9 372 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 BHLHE41Q9C0J9 482 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-208ENST00000443046 C12orf65Q9H3J6 166 aaKnown RBP12.56□□□□□ -0.4
HMGN1-208ENST00000443046 SERINC1Q9NRX5 453 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 BAIAP2L1Q9UHR4 511 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 KCNE5Q9UJ90 142 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 EMCNQ9ULC0 261 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 MOKQ9UQ07 419 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 PTGDR2Q9Y5Y4 395 aa12.56□□□□□ -0.4
HMGN1-208ENST00000443046 A0A0A6YYJ9 748 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 LRP5LA4QPB2 252 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 SERINC4A6NH21 518 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 SLCO1B7G3V0H7 640 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 DNPH1O43598 174 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 LILRA1O75019 489 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 VENTXO95231 258 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 STAMBPO95630 424 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 PMS2P2O95744 297 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 GSTA1P08263 222 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 IL2RGP31785 369 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 SERPINF1P36955 418 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 SNRPD2P62316 118 aaKnown RBP12.55□□□□□ -0.4
HMGN1-208ENST00000443046 RFTN2Q52LD8 501 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-208ENST00000443046 RNF165Q6ZSG1 346 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 CCDC103Q8IW40 242 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 PIGXQ8TBF5 258 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 ADAMTS15Q8TE58 950 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 CCDC126Q96EE4 140 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 SDF2Q99470 211 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 CCDC106Q9BWC9 280 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 NMUR2Q9GZQ4 415 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 TSPYL1Q9H0U9 437 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 ACER3Q9NUN7 267 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 ATP6V1HQ9UI12 483 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 CMYA5Q8N3K9 4069 aa12.55□□□□□ -0.4
HMGN1-208ENST00000443046 A0A087WUV0 522 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-208ENST00000443046 B9A039 149 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 SLC28A1O00337 649 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 ECHS1P30084 290 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 CCT3P49368 545 aaKnown RBP12.54□□□□□ -0.4
HMGN1-208ENST00000443046 CCR4P51679 360 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 MERTKQ12866 999 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 EFNB3Q15768 340 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 ZNF141Q15928 474 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 PDZK1Q5T2W1 519 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 AP1ARQ63HQ0 302 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 BHLHB9Q6PI77 547 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 TMCO5AQ8N6Q1 288 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 LINC01356Q8N9X3 169 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 CLHC1Q8NHS4 586 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 SGMS2Q8NHU3 365 aa12.54□□□□□ -0.4
HMGN1-208ENST00000443046 ZMYND19Q96E35 227 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms