RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 ZZZ3Q8IYH5 903 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 CLIP4Q8N3C7 705 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 POU5F2Q8N7G0 328 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 NAXEQ8NCW5 288 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 OR10D3Q8NH80 312 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 RCN3Q96D15 328 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 SLC39A3Q9BRY0 314 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 SFXN3Q9BWM7 321 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 TRIM8Q9BZR9 551 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 TIGARQ9NQ88 270 aa13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 MCTS1Q9ULC4 181 aaKnown RBP13.51□□□□□ -0.25
CSNK1E-210ENST00000442216 TNFSF11O14788 317 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 SHOX2O60902 331 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 DCTN3O75935 186 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 TGM6O95932 706 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 TMIGD3P0DMS9 266 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 PCGF2P35227 344 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 SFTPDP35247 375 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 CARD18P57730 90 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 COPZ1P61923 177 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 VEZF1Q14119 521 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 PON3Q15166 354 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 VMACQ2NL98 169 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 TMEM176BQ3YBM2 270 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 RABL3Q5HYI8 236 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 HBMQ6B0K9 141 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 POMZP3Q6PJE2 187 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 PATL1Q86TB9 770 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 CPNE4Q96A23 557 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 REXO5Q96IC2 774 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 ZNF845Q96IR2 970 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 CCT8L2Q96SF2 557 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 HOPXQ9BPY8 73 aaPredicted RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 GPATCH1Q9BRR8 931 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 ADAM19Q9H013 955 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 TMEM185BQ9H7F4 350 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 RNF122Q9H9V4 155 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 CTPS2Q9NRF8 586 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 CHRNA9Q9UGM1 479 aa13.5□□□□□ -0.25
CSNK1E-210ENST00000442216 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 AP3D1O14617 1153 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 AIM2O14862 343 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 ZNF208O43345 1280 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 MFN2O95140 757 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 SYNGR4O95473 234 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 FAM107AO95990 144 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 C8BP07358 591 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 GKN3PP0CG01 181 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 POLR2HP52434 150 aaKnown RBP13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 TFF3Q07654 80 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 FAM91A1Q658Y4 838 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 SP5Q6BEB4 398 aaPredicted RBP13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 GTF2IRD2BQ6EKJ0 949 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 WBP2NLQ6ICG8 309 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 GTF2IRD2Q86UP8 949 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 ADGRG3Q86Y34 549 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 LIX1LQ8IVB5 337 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 RASSF5Q8WWW0 418 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 FIG4Q92562 907 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 OSTF1Q92882 214 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 LRRC46Q96FV0 321 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 ZNF583Q96ND8 569 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 LRRC37BQ96QE4 947 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 GLRX2Q9NS18 164 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 KLHL28Q9NXS3 571 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 ADAM21Q9UKJ8 722 aa13.49□□□□□ -0.25
CSNK1E-210ENST00000442216 FAM220BPB1ANY3 271 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 M0QX08 132 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 SYT5O00445 386 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 CXCL13O43927 109 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 OPN1LWP04000 364 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 BMP5P22003 454 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 SHC1P29353 583 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 SLC7A1P30825 629 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 RAC3P60763 192 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 FBXL19-AS1Q494R0 122 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 SYT14P1Q58G82 188 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 GKAP1Q5VSY0 366 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 C8orf82Q6P1X6 216 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 ACBD4Q8NC06 268 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 RELL2Q8NC24 303 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 FNDC9Q8TBE3 224 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 INTS12Q96CB8 462 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 PRRG4Q9BZD6 226 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 UCK2Q9BZX2 261 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 PIGMQ9H3S5 423 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 COQ10BQ9H8M1 238 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 JKAMPQ9P055 326 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 FOXD3Q9UJU5 478 aaPredicted RBP13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 OSGIN1Q9UJX0 560 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 HDGFL3Q9Y3E1 203 aa13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 ASH1LQ9NR48 2969 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-210ENST00000442216 COL12A1Q99715 3063 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 TMED7-TICAM2A0A0A6YYA0 188 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 NKX2-6A6NCS4 301 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 FAM90A27PA6NNH2 459 aa13.47□□□□□ -0.25
CSNK1E-210ENST00000442216 TPST1O60507 370 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms