RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ZNF232Q9UNY5 417 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 WDR45Q9Y484 360 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 ANKHD1Q8IWZ3 2542 aaKnown RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 TMEM233B4DJY2 109 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 B4DXG7 233 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 ETV2O00321 342 aaPredicted RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 NTN1O95631 604 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 ADAP00813 363 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 OPN1LWP04000 364 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 EFNA1P20827 205 aaPredicted RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 OR3A2P47893 321 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 PTH2RP49190 550 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 VSNL1P62760 191 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 TGFBR3Q03167 851 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 MERTKQ12866 999 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 CD226Q15762 336 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 TIGD2Q4W5G0 525 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 GPAT3Q53EU6 434 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 TIMM23BQ5SRD1 257 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 NCMAPQ5T1S8 102 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 OR4F3Q6IEY1 312 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 HEPHL1Q6MZM0 1159 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 GRINAQ7Z429 371 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 ABHD12BQ7Z5M8 362 aaPredicted RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 ZAR1Q86SH2 424 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 AENQ8WTP8 325 aaKnown RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 NUDT8Q8WV74 236 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 AKAP1Q92667 903 aaKnown RBP eCLIP6.92□□□□□ -1.3
CD44-211ENST00000442151 FBXW5Q969U6 566 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 DDIT4LQ96D03 193 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 PERPQ96FX8 193 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 PKNOX2Q96KN3 472 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 MARK4Q96L34 752 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 ADAD1Q96M93 576 aaKnown RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 OR5B2Q96R09 309 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 TMEM204Q9BSN7 226 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 PIF1Q9H611 641 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 TMEM185BQ9H7F4 350 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 MARCOQ9UEW3 520 aaPredicted RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 TRAPPC4Q9Y296 219 aa6.92□□□□□ -1.3
CD44-211ENST00000442151 MAGED1Q9Y5V3 778 aaPredicted RBP6.92□□□□□ -1.3
CD44-211ENST00000442151 ABCA4P78363 2273 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 MTORP42345 2549 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 KIAA1549Q9HCM3 1950 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 A0A1W2PP18 115 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 CIB4A0PJX0 185 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 WDR91A4D1P6 747 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 C17orf51A8MQB3 221 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 H7C1Q1 480 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 DNAJA2O60884 412 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 PMS2P2O95744 297 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 TP53P04637 393 aaPredicted RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 THBDP07204 575 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 ATP5J2P56134 94 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 SESN3P58005 492 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 DSCR9P59020 149 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 SLC35A1P78382 337 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 PDCD2Q16342 344 aaPredicted RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 NRF1Q16656 503 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 PDZK1Q5T2W1 519 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 AGAP6Q5VW22 663 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 FAM219BQ5XKK7 198 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 CBLN3Q6UW01 205 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 TFAP2EQ6VUC0 442 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 GABRG1Q8N1C3 465 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 KRTCAP2Q8N6L1 136 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 RAB3IL1Q8TBN0 382 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 PIWIL2Q8TC59 973 aaKnown RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 ROPN1LQ96C74 230 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 NEURL3Q96EH8 262 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 COX4I2Q96KJ9 171 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 C3orf30Q96M34 536 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 TRNT1Q96Q11 434 aaKnown RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 GRIP2Q9C0E4 1043 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 ZNF350Q9GZX5 532 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 SAP130Q9H0E3 1048 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 OR51I1Q9H343 314 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 CENPHQ9H3R5 247 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 RAD21L1Q9H4I0 556 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 GSX1Q9H4S2 264 aaPredicted RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 RMND5AQ9H871 391 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 MOV10Q9HCE1 1003 aaKnown RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 FBXO9Q9UK97 447 aaPredicted RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 NOSIPQ9Y314 301 aaKnown RBP6.91□□□□□ -1.3
CD44-211ENST00000442151 SPG11Q96JI7 2443 aa6.91□□□□□ -1.3
CD44-211ENST00000442151 OR6C65A6NJZ3 312 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 VSTM5A8MXK1 200 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 E9PBE3 544 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 ZNF208O43345 1280 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 MRPL33O75394 65 aaKnown RBP6.9□□□□□ -1.3
CD44-211ENST00000442151 UGT2B17O75795 530 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 IL6P05231 212 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 DBIP07108 87 aaKnown RBP6.9□□□□□ -1.3
CD44-211ENST00000442151 VIMP08670 466 aaKnown RBP6.9□□□□□ -1.3
CD44-211ENST00000442151 OR12D1P0DN82 309 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 HOXB4P17483 251 aaPredicted RBP6.9□□□□□ -1.3
CD44-211ENST00000442151 GGT1P19440 569 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 ETV4P43268 484 aa6.9□□□□□ -1.3
CD44-211ENST00000442151 POLR2HP52434 150 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms