RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 LMF2Q9BU23 707 aaKnown RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 LYARQ9NX58 379 aaKnown RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ZNF490Q9ULM2 529 aaPredicted RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 TBC1D3FA6NER0 549 aaPredicted RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 C9J4A7 227 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ADAP00813 363 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 T-ENOLP0DO92 83 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SERPINA2P20848 420 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 NTSR1P30989 418 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 RPL5P46777 297 aaKnown RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 GTF2BQ00403 316 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 PLEKHN1Q494U1 663 aaPredicted RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ACSM6Q6P461 480 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 CBLN3Q6UW01 205 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ADIPOR2Q86V24 386 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ANGPTL5Q86XS5 388 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 WDFY1Q8IWB7 410 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 PRELID2Q8N945 189 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM234Q8WY98 164 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 IL12RB2Q99665 862 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 ILKAPQ9H0C8 392 aaPredicted RBP9.71□□□□□ -0.85
SYNE2-206ENST00000441438 IL21Q9HBE4 155 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SIX2Q9NPC8 291 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 SPHK1Q9NYA1 384 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 RNF150Q9ULK6 438 aa9.71□□□□□ -0.85
SYNE2-206ENST00000441438 MSH4O15457 936 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 NDUFS4O43181 175 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 LCMT2O60294 686 aaKnown RBP9.71□□□□□ -0.86
SYNE2-206ENST00000441438 TRMUO75648 421 aaKnown RBP9.71□□□□□ -0.86
SYNE2-206ENST00000441438 ASPAP45381 313 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 GLUD2P49448 558 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 ERVK11-1P61568 191 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 P2RY14Q15391 338 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 TAF13Q15543 124 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 DLK2Q6UY11 383 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 SCD5Q86SK9 330 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 OR9A4Q8NGU2 314 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 OR13D1Q8NGV5 346 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 APH1BQ8WW43 257 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 SERPINI1Q99574 410 aa9.71□□□□□ -0.86
SYNE2-206ENST00000441438 SULT1C2O00338 296 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 RGS5O15539 181 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 LRP3O75074 770 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 PAPSS2O95340 614 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-206ENST00000441438 MARK3P27448 753 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 FOXE3Q13461 319 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 FCRL6Q6DN72 434 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 NUP43Q8NFH3 380 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 ANKRD9Q96BM1 317 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-206ENST00000441438 OTULINQ96BN8 352 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 LMLNQ96KR4 655 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 MTERF1Q99551 399 aaKnown RBP9.7□□□□□ -0.86
SYNE2-206ENST00000441438 AMNQ9BXJ7 453 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 PITPNM3Q9BZ71 974 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 SPATC1LQ9H0A9 340 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 GPR132Q9UNW8 380 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 FOXJ3Q9UPW0 622 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 OR51B4Q9Y5P0 310 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 SMCO3A2RU48 225 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 PROB1E7EW31 1015 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 SOX1O00570 391 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-206ENST00000441438 PPP6CO00743 305 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 TGOLN2O43493 480 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 UGT2B11O75310 529 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 TFP02787 698 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 RRASP10301 218 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 GMPRP36959 345 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 PDLIM4P50479 330 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 DNAJB13P59910 316 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 SP4Q02446 784 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 CAV1Q03135 178 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 ABHD15Q6UXT9 468 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 LINGO4Q6UY18 593 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 MOB2Q70IA6 237 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 CSNK1A1LQ8N752 337 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 OR51D1Q8NGF3 324 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 FTHL17Q9BXU8 183 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 GAREM1Q9H706 876 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 SEBOXQ9HB31 216 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-206ENST00000441438 ACP6Q9NPH0 428 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 PRSS16Q9NQE7 514 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 FOXA2Q9Y261 457 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-206ENST00000441438 MYRFQ9Y2G1 1151 aa9.7□□□□□ -0.86
SYNE2-206ENST00000441438 MATKP42679 507 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PTGFRP43088 359 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 TFAMQ00059 246 aaKnown RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SLC34A1Q06495 639 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 TXNRD3NBQ6F5E7 133 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 TMEM107Q6UX40 140 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 DPY19L3Q6ZPD9 716 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 C2CD4AQ8NCU7 369 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 OR2AP1Q8NGE2 309 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 LNX1Q8TBB1 728 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SLC2A12Q8TD20 617 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ABHD3Q8WU67 409 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 U2AF1L4Q8WU68 220 aaKnown RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 RNF170Q96K19 258 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CDC42EP4Q9H3Q1 356 aaKnown RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 DHCR7Q9UBM7 475 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms