RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CDH10Q9Y6N8 788 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 CHD4Q14839 1912 aa3.3□□□□□ -1.88
PFDN4-202ENST00000441080 HELTA6NFD8 242 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 XPO1O14980 1071 aaKnown RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 RS1O15537 224 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 TBX19O60806 448 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 ADCY5O95622 1261 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 GUCA1CO95843 209 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 CD1BP29016 333 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 FGF9P31371 208 aaPredicted RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 SOX6P35712 828 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 CHI3L1P36222 383 aaPredicted RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 HNRNPA3P51991 378 aaKnown RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 ZNF133P52736 654 aaPredicted RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 APOC4P55056 127 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 CSNK1G2P78368 415 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 ARL6IP1Q15041 203 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 NADK2Q4G0N4 442 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 PYHIN1Q6K0P9 492 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 ZNF530Q6P9A1 599 aaPredicted RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 ATP6V0D2Q8N8Y2 350 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 ZNF740Q8NDX6 193 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 OR56B4Q8NH76 319 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 SH3YL1Q96HL8 342 aaPredicted RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 C7orf34Q96L11 122 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 EDEM2Q9BV94 578 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 NANOGQ9H9S0 305 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 APMAPQ9HDC9 416 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 SLC17A5Q9NRA2 495 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 TBK1Q9UHD2 729 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 PHF11Q9UIL8 331 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 ISY1Q9ULR0 285 aaKnown RBP3.29□□□□□ -1.88
PFDN4-202ENST00000441080 RASD1Q9Y272 281 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 UGT2A1Q9Y4X1 527 aa3.29□□□□□ -1.88
PFDN4-202ENST00000441080 PLEKHG1Q9ULL1 1385 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 USP27XA6NNY8 438 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 PANO1I0J062 215 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 ANGPT2O15123 496 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 N4BP1O75113 896 aaKnown RBP3.28□□□□□ -1.88
PFDN4-202ENST00000441080 SNAPINO95295 136 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 ALOX5P09917 674 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 ANXA13P27216 316 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 RGS4P49798 205 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 KLHL30Q0D2K2 578 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 ZNF630Q2M218 657 aaPredicted RBP3.28□□□□□ -1.88
PFDN4-202ENST00000441080 TP53I3Q53FA7 332 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 ACOT7LQ6ZUV0 252 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 CLEC4FQ8N1N0 589 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 DCAF4L2Q8NA75 395 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 LINC01555Q8NAE3 123 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 SYT14Q8NB59 555 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 OR4D9Q8NGE8 314 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 LINC00167Q96N53 147 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 AMDHD1Q96NU7 426 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 POLR2J2Q9GZM3 115 aaKnown RBP3.28□□□□□ -1.88
PFDN4-202ENST00000441080 RAB33BQ9H082 229 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 POLR2J3Q9H1A7 115 aaKnown RBP3.28□□□□□ -1.88
PFDN4-202ENST00000441080 SH3BGRL2Q9UJC5 107 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 ERVW-1Q9UQF0 538 aa3.28□□□□□ -1.88
PFDN4-202ENST00000441080 AK6Q9Y3D8 172 aaKnown RBP3.28□□□□□ -1.88
PFDN4-202ENST00000441080 CLSPNQ9HAW4 1339 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 A0A0G2JRQ6 117 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 PINLYPA6NC86 204 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 BTN3A3O00478 584 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 UGT2B4P06133 528 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 NR2C1P13056 603 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 RPA2P15927 270 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 POLR2EP19388 210 aaKnown RBP3.27□□□□□ -1.89
PFDN4-202ENST00000441080 HNRNPA2B1P22626 353 aaKnown RBP3.27□□□□□ -1.89
PFDN4-202ENST00000441080 DAP3P51398 398 aaKnown RBP3.27□□□□□ -1.89
PFDN4-202ENST00000441080 BIDP55957 195 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 HSD17B7P56937 341 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 CBX1P83916 185 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 ARFRP1Q13795 201 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 SLC25A52Q3SY17 297 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 SLC25A24Q6NUK1 477 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 SLC38A6Q8IZM9 456 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 OR2T34Q8NGX1 318 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 RNF138Q8WVD3 245 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 RAB7BQ96AH8 199 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 NIPSNAP3BQ9BS92 247 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 AATFQ9NY61 560 aaKnown RBP eCLIP3.27□□□□□ -1.89
PFDN4-202ENST00000441080 TREM2Q9NZC2 230 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 IL36GQ9NZH8 169 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 RNF14Q9UBS8 474 aa3.27□□□□□ -1.89
PFDN4-202ENST00000441080 RAI1Q7Z5J4 1906 aaPredicted RBP3.27□□□□□ -1.89
PFDN4-202ENST00000441080 KIF16BQ96L93 1317 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 A0A1B0GUS0 222 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 A0A1W2PNU3 283 aaPredicted RBP3.26□□□□□ -1.89
PFDN4-202ENST00000441080 PSMB11A5LHX3 300 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 TRDCB7Z8K6 153 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 TAPBPO15533 448 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 CXCL13O43927 109 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 OR10H3O60404 316 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 ZNF780AO75290 641 aaPredicted RBP3.26□□□□□ -1.89
PFDN4-202ENST00000441080 KIAA0754O94854 1291 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 LGALS2P05162 132 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 RBMY1CP0DJD4 496 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 PSMA5P28066 241 aa3.26□□□□□ -1.89
PFDN4-202ENST00000441080 HTR1EP28566 365 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms