RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OR51A7Q8NH64 312 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 C3orf49Q96BT1 292 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 SGTBQ96EQ0 304 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 SLC7A5P2Q9GIP4 190 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 IGLV3-12A0A075B6K2 115 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 A0A1W2PQM1 296 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF12P17014 697 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 CCL7P80098 99 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 SKP2Q13309 424 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 WBP2NLQ6ICG8 309 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 PLBD1Q6P4A8 553 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 MFSD4AQ8N468 514 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF485Q8NCK3 441 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 HSPBAP1Q96EW2 488 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 MCCC2Q9HCC0 563 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF318Q5VUA4 2279 aa23.57■■□□□ 1.36
CPNE1-216ENST00000437340 COL5A1P20908 1838 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-216ENST00000437340 SOCS6O14544 535 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 TPBGQ13641 420 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 FHL1Q13642 323 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 CD226Q15762 336 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 LIPKQ5VXJ0 399 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 SLC23A3Q6PIS1 610 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 COX15Q7KZN9 410 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 IGFN1Q86VF2 1251 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 LAPTM4BQ86VI4 370 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 C9orf40Q8IXQ3 194 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 OR4F15Q8NGB8 312 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 TNFRSF13CQ96RJ3 184 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 GAL3ST4Q96RP7 486 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 ARHGAP9Q9BRR9 750 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 CDADC1Q9BWV3 514 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 TNFRSF10DQ9UBN6 386 aa23.56■■□□□ 1.36
CPNE1-216ENST00000437340 RIIAD1A6NNX1 92 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 J3QRE1 110 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF264O43296 627 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 GALR2O43603 387 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PRKNO60260 465 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PNMTP11086 282 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PEPDP12955 493 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PAICSP22234 425 aaKnown RBP23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SOX6P35712 828 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 RAB15P59190 212 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PSPHP78330 225 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 ARHGAP11AQ6P4F7 1023 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SLC29A4Q7RTT9 530 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 C17orf47Q8NEP4 570 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PHOSPHO1Q8TCT1 267 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 LRFN5Q96NI6 719 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 LRRN3Q9H3W5 708 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SMOC1Q9H4F8 434 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SLC22A11Q9NSA0 550 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 CTSFQ9UBX1 484 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SSR3Q9UNL2 185 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SPIN1Q9Y657 262 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-216ENST00000437340 R4GN57 208 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SLC22A31A6NKX4 558 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 FAM183AA6NL82 134 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PRR23D1E9PI22 279 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-216ENST00000437340 TSPAN19P0C672 248 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PRR23D2P0DMB1 279 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-216ENST00000437340 BMP4P12644 408 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 HK1P19367 917 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 ATP6V1E1P36543 226 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 ACSM1Q08AH1 577 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SLC35F1Q5T1Q4 408 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 OR2G6Q5TZ20 316 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 SHFQ7M4L6 423 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PRSS58Q8IYP2 241 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 KLHL36Q8N4N3 616 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 OR52N1Q8NH53 320 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 PHOX2BQ99453 314 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF649Q9BS31 505 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 WWTR1Q9GZV5 400 aa23.55■■□□□ 1.36
CPNE1-216ENST00000437340 EXOSC4Q9NPD3 245 aaKnown RBP23.55■■□□□ 1.36
CPNE1-216ENST00000437340 IGHV5-10-1A0A0J9YXX1 117 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 GTPBP1O00178 669 aaKnown RBP23.54■■□□□ 1.36
CPNE1-216ENST00000437340 NDUFB2O95178 105 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF3P17036 446 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 SLC37A3Q8NCC5 494 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 TM9SF4Q92544 642 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 UFD1Q92890 307 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 ADOQ96SZ5 270 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 LAT2Q9GZY6 243 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 ERVK13-1Q9NX77 482 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 FRYLO94915 3013 aa23.54■■□□□ 1.36
CPNE1-216ENST00000437340 REM1O75628 298 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 IFNGP01579 166 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 IL12BP29460 328 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 ITGADQ13349 1161 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 INAQ16352 499 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF362Q5T0B9 420 aaPredicted RBP23.53■■□□□ 1.36
CPNE1-216ENST00000437340 APOOLQ6UXV4 268 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF441Q8N8Z8 693 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 STT3BQ8TCJ2 826 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 GATAD2BQ8WXI9 593 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 OTULINQ96BN8 352 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 OR6C1Q96RD1 312 aa23.53■■□□□ 1.36
CPNE1-216ENST00000437340 SECISBP2Q96T21 854 aaKnown RBP23.53■■□□□ 1.36
CPNE1-216ENST00000437340 RARRES3Q9UL19 164 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms