RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF814B7Z6K7 855 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CHEK1O14757 476 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 LGI1O95970 557 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 POU2F2P09086 479 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 LAPTM4AQ15012 233 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 C14orf28Q4W4Y0 310 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 FAM199XQ6PEV8 388 aaPredicted RBP10.5□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF439Q8NDP4 499 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 C11orf40Q8WZ69 217 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 ISG20Q96AZ6 181 aaKnown RBP10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TIMM29Q9BSF4 260 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 BARHL1Q9BZE3 327 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 RIMS3Q9UJD0 308 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 F5H5P2 479 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 OR10J4P0C629 311 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 HOXD11P31277 338 aaPredicted RBP10.5□□□□□ -0.73
SCN4A-201ENST00000435607 EDDM3BP56851 147 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TEKQ02763 1124 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CRMP1Q14194 572 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TSSK4Q6SA08 328 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 OR9I1Q8NGQ6 314 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 OR5W2Q8NH69 310 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 SYNPO2LQ9H987 977 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TAAR2Q9P1P5 351 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 RNF24Q9Y225 148 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 ASB4Q9Y574 426 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 ATP23Q9Y6H3 246 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 HIDE1A8MVS5 230 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CXorf49A8MYA2 514 aaPredicted RBP10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CYB561P49447 251 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 BATFQ16520 125 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 C9orf135Q5VTT2 229 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CYP4V2Q6ZWL3 525 aaPredicted RBP10.5□□□□□ -0.73
SCN4A-201ENST00000435607 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 HMGN2P46Q86SG4 172 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TERB2Q8NHR7 220 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 BOCQ9BWV1 1114 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 BIN3Q9NQY0 253 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 IER3IP1Q9Y5U9 82 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 PRAMEF27A3QJZ7 478 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 SEC14L6B5MCN3 397 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TOXO94900 526 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 C17orf67Q0P5P2 114 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 NFATC4Q14934 902 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 PRAMEF9Q5VWM5 478 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TMEFF1Q8IYR6 380 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 OR52R1Q8NGF1 315 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TLCD1Q96CP7 247 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TLE1Q04724 770 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 NLRC3Q7RTR2 1065 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 WDR5BQ86VZ2 330 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 C1orf87Q8N0U7 546 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SLC35G3Q8N808 338 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SLC41A2Q96JW4 573 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 ARID1BQ8NFD5 2236 aaPredicted RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 OSMP13725 252 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 PRDX3P30048 256 aaKnown RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 CLDN2P57739 230 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 PNCKQ6P2M8 343 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 METTL4Q8N3J2 472 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SLC6A18Q96N87 628 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 UHRF1Q96T88 793 aaPredicted RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 QPCTLQ9NXS2 382 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 MRPL15Q9P015 296 aaKnown RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SIX4Q9UIU6 781 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SHISA7A6NL88 538 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 HLA-DOBP13765 273 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 CEBPBP17676 345 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SLC5A2P31639 672 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SRP14P37108 136 aaKnown RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 MLF2Q15773 248 aaPredicted RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 RNLSQ5VYX0 342 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 IRF2BP1Q8IU81 584 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 TCEAL8Q8IYN2 117 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 TPPP3Q9BW30 176 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 FAM234AQ9H0X4 552 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 GAREM1Q9H706 876 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 TSPAN11A1L157 253 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 ABCD4O14678 606 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 OR7C1O76099 320 aaPredicted RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 SERPINF1P36955 418 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 DCTP40126 519 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 NR4A2P43354 598 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 MTCP1P56278 107 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 IL13RA1P78552 427 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 RAB35Q15286 201 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 FAM69AQ5T7M9 428 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 GAREM2Q75VX8 874 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 BEST4Q8NFU0 473 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 PLEKHO2Q8TD55 490 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 DPH1Q9BZG8 443 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 TCRBV7S3A2A0A539 114 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 IL2RAP01589 272 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 APOC3P02656 99 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 TMEM176BQ3YBM2 270 aaPredicted RBP10.49□□□□□ -0.73
SCN4A-201ENST00000435607 M1APQ8TC57 530 aa10.49□□□□□ -0.73
SCN4A-201ENST00000435607 ADAMTS19Q8TE59 1207 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms