RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 WARS2Q9UGM6 360 aaKnown RBP4.59□□□□□ -1.67
USP54-206ENST00000433394 PHF11Q9UIL8 331 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 SCML2Q9UQR0 700 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 PDE10AQ9Y233 779 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 PIGLQ9Y2B2 252 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 AK6Q9Y3D8 172 aaKnown RBP4.59□□□□□ -1.67
USP54-206ENST00000433394 TIAM1Q13009 1591 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 SNED1Q8TER0 1413 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 RPAP1Q9BWH6 1393 aaPredicted RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 GNA14O95837 355 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 CYP2B6P20813 491 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 VDAC1P21796 283 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 GCAP28676 217 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 RDXP35241 583 aaKnown RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 DAP3P51398 398 aaKnown RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 HNRNPA3P51991 378 aaKnown RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 CXCL6P80162 114 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 CUL1Q13616 776 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 SSX2Q16385 188 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 SLC25A52Q3SY17 297 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 PAN3Q58A45 887 aaKnown RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 FAM120AOSQ5T036 256 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 UFSP1Q6NVU6 142 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 MOB1BQ7L9L4 216 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 ARCQ7LC44 396 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 APOBEC3FQ8IUX4 373 aaKnown RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 TRPV1Q8NER1 839 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 OR5D13Q8NGL4 314 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 OR9A1PQ8NGU1 263 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 HTR3CQ8WXA8 447 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 TUBGCP3Q96CW5 907 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 CLCC1Q96S66 551 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 NHEJ1Q9H9Q4 299 aaPredicted RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 RAB18Q9NP72 206 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 SMOXQ9NWM0 555 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 OR1A1Q9P1Q5 309 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 TMCO1Q9UM00 188 aa4.58□□□□□ -1.68
USP54-206ENST00000433394 PRPF19Q9UMS4 504 aaKnown RBP4.58□□□□□ -1.68
USP54-206ENST00000433394 RAPGEF6Q8TEU7 1601 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 PCF11O94913 1555 aaKnown RBP4.57□□□□□ -1.68
USP54-206ENST00000433394 UHRF1BP1LA0JNW5 1464 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 FHOD3Q2V2M9 1422 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 PRG4Q92954 1404 aaPredicted RBP4.57□□□□□ -1.68
USP54-206ENST00000433394 LOC100131303A0A0U1RQF7 123 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 WWP2O00308 870 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 PRKYO43930 277 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 OR10H3O60404 316 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 TSC22D2O75157 780 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 ECI2O75521 394 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 MMP11P24347 488 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 HMGB2P26583 209 aaKnown RBP4.57□□□□□ -1.68
USP54-206ENST00000433394 PRKXP51817 358 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 BCL2L1Q07817 233 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 DPYSL3Q14195 570 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 ARL6IP1Q15041 203 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 LPAL2Q16609 132 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 KLHL38Q2WGJ6 581 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 RABL6Q3YEC7 729 aaPredicted RBP4.57□□□□□ -1.68
USP54-206ENST00000433394 PHYHD1Q5SRE7 291 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 CDC20BQ86Y33 519 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 LYG1Q8N1E2 194 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 OR4D9Q8NGE8 314 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 RAPGEF5Q92565 580 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 BADQ92934 168 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 FBXO32Q969P5 355 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 SEC22AQ96IW7 307 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 CELF6Q96J87 481 aaKnown RBP4.57□□□□□ -1.68
USP54-206ENST00000433394 TCEANC2Q96MN5 208 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 IL4I1Q96RQ9 567 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 KIR2DL4Q99706 377 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 SLITRK2Q9H156 845 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 RHBGQ9H310 441 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 FANCFQ9NPI8 374 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 HYPKQ9NX55 129 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 APOBEC3BQ9UH17 382 aaKnown RBP4.57□□□□□ -1.68
USP54-206ENST00000433394 KLHL21Q9UJP4 597 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 NAP1L2Q9ULW6 460 aaPredicted RBP4.57□□□□□ -1.68
USP54-206ENST00000433394 CA5BQ9Y2D0 317 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 ASB3Q9Y575 518 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 TIMM10BQ9Y5J6 103 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 N6AMT1Q9Y5N5 214 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 ABCA8O94911 1581 aa4.57□□□□□ -1.68
USP54-206ENST00000433394 EHBP1L1Q8N3D4 1523 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 COL5A2P05997 1499 aaPredicted RBP4.56□□□□□ -1.68
USP54-206ENST00000433394 PTPRGP23470 1445 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP54-206ENST00000433394 IGHV3-35A0A0C4DH35 117 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 TRDCB7Z8K6 153 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 KIF2AO00139 706 aaPredicted RBP4.56□□□□□ -1.68
USP54-206ENST00000433394 CXCL13O43927 109 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 WBP4O75554 376 aaKnown RBP4.56□□□□□ -1.68
USP54-206ENST00000433394 CIB2O75838 187 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 THY1P04216 161 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 LGALS2P05162 132 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 CCDC166P0CW27 439 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 MX1P20591 662 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 GNA11P29992 359 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 MDH2P40926 338 aaKnown RBP4.56□□□□□ -1.68
USP54-206ENST00000433394 MAGEA8P43361 318 aa4.56□□□□□ -1.68
USP54-206ENST00000433394 CDH4P55283 916 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms