RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 DNPH1O43598 174 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 FCMRO60667 390 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 TP53P04637 393 aaPredicted RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 GGT1P19440 569 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 CDKN1AP38936 164 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 APOBEC1P41238 236 aaKnown RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 ETV4P43268 484 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 NRF1Q16656 503 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 DPY19L1Q2PZI1 675 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 ATAD3BQ5T9A4 648 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 AP1ARQ63HQ0 302 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 OR4F3Q6IEY1 312 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 ATG4DQ86TL0 474 aaPredicted RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 ZNF100Q8IYN0 542 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 CLECL1Q8IZS7 167 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 FAM71CQ8NEG0 241 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 VPS37AQ8NEZ2 397 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 ZNF75CPQ92670 426 aaPredicted RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 TRAF4Q9BUZ4 470 aaPredicted RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 REG4Q9BYZ8 158 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 QRSL1Q9H0R6 528 aaKnown RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 CISD1Q9NZ45 108 aaKnown RBP13.17□□□□□ -0.3
MSH5-208ENST00000429846 CHRNA9Q9UGM1 479 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 MKLN1Q9UL63 735 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 ABCA1O95477 2261 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 PLCE1Q9P212 2302 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 DNHD1Q96M86 4753 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 OR5H1A6NKK0 313 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 SHISA9B4DS77 424 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 GPR171O14626 319 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 TYROBPO43914 113 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 PGM3O95394 542 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 PMS2P2O95744 297 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 IGHV1-2P23083 117 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 PGM1P36871 562 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 CDH11P55287 796 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 FBXW9Q5XUX1 488 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 DNM1P46Q6ZS02 220 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 GRINAQ7Z429 371 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 MTDHQ86UE4 582 aaKnown RBP13.16□□□□□ -0.3
MSH5-208ENST00000429846 LRRC34Q8IZ02 419 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 OR4A15Q8NGL6 344 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 ZNF563Q8TA94 476 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 PIGXQ8TBF5 258 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 NEUROG1Q92886 237 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 TESCQ96BS2 214 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
MSH5-208ENST00000429846 HS6ST2Q96MM7 605 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 MDFIQ99750 246 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 OR51I1Q9H343 314 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 ADAM21Q9UKJ8 722 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 HDGFL3Q9Y3E1 203 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 WDR45Q9Y484 360 aa13.16□□□□□ -0.3
MSH5-208ENST00000429846 ATRQ13535 2644 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 CENPVL1A0A0U1RR11 272 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 PRSS51A0A1B0GVH4 220 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 ABCD4O14678 606 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 TLX2O43763 284 aaPredicted RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 IGHV4-39P01824 125 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 UQCRC2P22695 453 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 ACVR1BP36896 505 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 KHKP50053 298 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 HPCAP84074 193 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 FAPQ12884 760 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 ANXA8L1Q5VT79 327 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 TYW3Q6IPR3 259 aaKnown RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 TMEM108Q6UXF1 575 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 CXXC5Q7LFL8 322 aaKnown RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 NUDCD3Q8IVD9 361 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 ZNF433Q8N7K0 673 aaPredicted RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 APH1AQ96BI3 265 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 DPY30Q9C005 99 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 EXOSC3Q9NQT5 275 aaKnown RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 MALT1Q9UDY8 824 aa13.15□□□□□ -0.3
MSH5-208ENST00000429846 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
MSH5-208ENST00000429846 ZNF716A6NP11 495 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 C9JVG2 144 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 RAMP1O60894 148 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 SCN2BO60939 215 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 RAD51DO75771 328 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 SERPINE1P05121 402 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 MYZAPP0CAP1 466 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 OR12D1P0DN82 309 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 TFPIP10646 304 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 EDNRAP25101 427 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 HTR3AP46098 478 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 SLC16A1P53985 500 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 CLNS1AP54105 237 aaKnown RBP13.14□□□□□ -0.31
MSH5-208ENST00000429846 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
MSH5-208ENST00000429846 MAPK14Q16539 360 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 AGAP6Q5VW22 663 aa13.14□□□□□ -0.31
MSH5-208ENST00000429846 SAXO2Q658L1 398 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms