RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 EIF5AP63241 154 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 KIAA0141Q14154 515 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 SLC9A5Q14940 896 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 XKR6Q5GH73 641 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF385CQ66K41 422 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ADAM5Q6NVV9 412 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 LRRTM1Q86UE6 522 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 NR2C2APQ86WQ0 139 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 GTPBP8Q8N3Z3 284 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 HSD17B11Q8NBQ5 300 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 AQP11Q8NBQ7 271 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR52J3Q8NH60 311 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 SPPL2AQ8TCT8 520 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 SH3RF2Q8TEC5 729 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 PTCHD1Q96NR3 888 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 C16orf70Q9BSU1 422 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 WDR13Q9H1Z4 485 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 SMOC1Q9H4F8 434 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ACER3Q9NUN7 267 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 NME7Q9Y5B8 376 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 RALGAPA2Q2PPJ7 1873 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 M0R143 59 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 NDUFS8O00217 210 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TSPAN2O60636 221 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 FARS2O95363 451 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 DIRAS3O95661 229 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 PRPS2P11908 318 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 ETFAP13804 333 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 HNF1AP20823 631 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 FGF7P21781 194 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 MC3RP41968 323 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 CCR4P51679 360 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TTLL4Q14679 1199 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 ABRAXAS2Q15018 415 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 PLEKHN1Q494U1 663 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SCGB2B2Q4G0G5 96 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 IFI44LQ53G44 452 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 OLFML2AQ68BL7 652 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 GID4Q8IVV7 300 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 DNAAF1Q8NEP3 725 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR2AK2Q8NG84 335 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR5M1Q8NGP8 315 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 PIGXQ8TBF5 258 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 NEK7Q8TDX7 302 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 CMTM7Q96FZ5 175 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 DDA1Q9BW61 102 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TMEM185BQ9H7F4 350 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SAGE1Q9NXZ1 904 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SPG21Q9NZD8 308 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 RASD1Q9Y272 281 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3BA6NDS4 549 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 GGT3PA6NGU5 568 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 NPIPB8E9PQR5 432 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 MFNGO00587 321 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 CYTIPO60759 359 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 FKTNO75072 461 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 GGCTO75223 188 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 GASTP01350 101 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SERPIND1P05546 499 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TDGF1P3P51864 188 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SORDQ00796 357 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 DDX39BQ13838 428 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SLC10A1Q14973 349 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 GOLGA7BQ2TAP0 167 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SLC25A52Q3SY17 297 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 C18orf63Q68DL7 685 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TBC1D3GQ6DHY5 549 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF770Q6IQ21 691 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 CFAP161Q6P656 301 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TSSK4Q6SA08 328 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF574Q6ZN55 896 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 LANCL3Q6ZV70 420 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR52B6Q8NGF0 335 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 RNF141Q8WVD5 230 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 SORCS1Q8WY21 1168 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 EDEM1Q92611 657 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZFP3Q96NJ6 502 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 NECAB3Q96P71 396 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 F2RL3Q96RI0 385 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF471Q9BX82 626 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 TMEM27Q9HBJ8 222 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 FAM120CQ9NX05 1096 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 KCND3Q9UK17 655 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 GJD2Q9UKL4 321 aa8.24□□□□□ -1.09
CDC42BPA-206ENST00000429440 MYLKQ15746 1914 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 PDCD11Q14690 1871 aaKnown RBP8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 A0A087WUJ7 227 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 A0A1B0GVC2 190 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 A6NIN4 97 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR2AT4A6NND4 320 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 IDSB3KWA1 339 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 H7C417 338 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 EFSO43281 561 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 NDUFB6O95139 128 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF286BP0CG31 522 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 ACP2P11117 423 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 PRPS1L1P21108 318 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 THBS4P35443 961 aa8.23□□□□□ -1.09
CDC42BPA-206ENST00000429440 AHRP35869 848 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms