RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 OR52E4Q8NGH9 312 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GPR119Q8TDV5 335 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PHF10Q8WUB8 498 aaKnown RBP8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 FEVQ99581 238 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ARHGDIGQ99819 225 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 LHPPQ9H008 270 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 ICAM5Q9UMF0 924 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 YARS2Q9Y2Z4 477 aaKnown RBP8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 PRR14LQ5THK1 2151 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 GTF3C1Q12789 2109 aa8.66□□□□□ -1.02
HMGCLL1-206ENST00000428842 A0A087WUU8 490 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 CDC42EP2O14613 210 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC25A12O75746 678 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SOX30O94993 753 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 AGR2O95994 175 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ITGB2P05107 769 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SHC1P29353 583 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 DAPP51397 102 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ALDH3A2P51648 485 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 MLLT10P55197 1068 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 AIMP2Q13155 320 aaKnown RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 DAG1Q14118 895 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 RAB39AQ14964 217 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 OR1C1Q15619 314 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 NTRK2Q16620 822 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ABHD17BQ5VST6 288 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 PRICKLE2Q7Z3G6 844 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 YRDCQ86U90 279 aaKnown RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 EID3Q8N140 333 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 KDM8Q8N371 416 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF563Q8TA94 476 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SNIP1Q8TAD8 396 aaKnown RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SMPDL3BQ92485 455 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 FAM46AQ96IP4 442 aaKnown RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 PIP5K1AQ99755 562 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 TUBA1CQ9BQE3 449 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 PRSS27Q9BQR3 290 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 KIAA1549Q9HCM3 1950 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 G3V2T6 193 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 HS6ST1O60243 411 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 DEAF1O75398 565 aaPredicted RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 HPRP00739 348 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ALPLP05186 524 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 JUNBP17275 347 aaPredicted RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 CYB561P49447 251 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 STARP49675 285 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 UGT2B15P54855 530 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 GNA13Q14344 377 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 C3AR1Q16581 482 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ZNF605Q86T29 641 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 IGFN1Q86VF2 1251 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 NRMQ8IXM6 262 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC22A8Q8TCC7 542 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC41A3Q96GZ6 507 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 RDH12Q96NR8 316 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ALPK1Q96QP1 1244 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SPATA5L1Q9BVQ7 753 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 FNDC11Q9BVV2 318 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 MEPEQ9NQ76 525 aaPredicted RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 CALML5Q9NZT1 146 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 SLC9A8Q9Y2E8 581 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 AP3M1Q9Y2T2 418 aa8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 FAM32AQ9Y421 112 aaKnown RBP8.65□□□□□ -1.02
HMGCLL1-206ENST00000428842 ALG1L2C9J202 215 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 H3BMQ9 156 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR10H3O60404 316 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 SERPINI2O75830 405 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 LYPD3O95274 346 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 IFNA14P01570 189 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 CD82P27701 267 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 TACR3P29371 465 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 DCAF7P61962 342 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 KCNC4Q03721 635 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 QPRTQ15274 297 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 ALG10BQ5I7T1 473 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 IGF2-ASQ6U949 168 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 KCTD8Q6ZWB6 473 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 CROCCP3Q8IVE0 287 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 IQCF1Q8N6M8 205 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 AQP11Q8NBQ7 271 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 OR8K3Q8NH51 312 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 ARL5BQ96KC2 179 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 COG8Q96MW5 612 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 EGLN3Q9H6Z9 239 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 REEP1Q9H902 201 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 DNAJB9Q9UBS3 223 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 IFT52Q9Y366 437 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 PCDHGA10Q9Y5H3 936 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 WIF1Q9Y5W5 379 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 PHF3Q92576 2039 aaKnown RBP8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 A0A1W2PQ72 361 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 IMPA2O14732 288 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 ATE1O95260 518 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 IGHEP01854 428 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 THBS1P07996 1170 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 POU1F1P28069 291 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 SFTPDP35247 375 aa8.64□□□□□ -1.03
HMGCLL1-206ENST00000428842 MASP1P48740 699 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms