RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CADM2Q8N3J6 435 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 FADS6Q8N9I5 356 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 CLEC1AQ8NC01 280 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 OR52L1Q8NGH7 329 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 ZNF563Q8TA94 476 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 IPCEF1Q8WWN9 437 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-209ENST00000428574 ZBTB8AQ96BR9 441 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 TMEM41AQ96HV5 264 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 MRGPRX4Q96LA9 322 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 Q96MT0 163 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 NODALQ96S42 347 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 POLDIP3Q9BY77 421 aaKnown RBP8.27□□□□□ -1.09
NR1I3-209ENST00000428574 LHPPQ9H008 270 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 PTGES2Q9H7Z7 377 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 CTPS2Q9NRF8 586 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 SACM1LQ9NTJ5 587 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 HPF1Q9NWY4 346 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 KLRF1Q9NZS2 232 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 TPRKBQ9Y3C4 175 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 ZNF337Q9Y3M9 751 aa8.27□□□□□ -1.09
NR1I3-209ENST00000428574 SPIN1Q9Y657 262 aaPredicted RBP8.27□□□□□ -1.09
NR1I3-209ENST00000428574 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 UNC119BA6NIH7 251 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SNTNA6NMZ2 147 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 A8MVM7 634 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 EFCAB9A8MZ26 197 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FAM47E-STBD1D6RA91 191 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 H3BN98 237 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SCO2O43819 266 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 IDH3BO43837 385 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 OR2T1O43869 369 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 NTN1O95631 604 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 HMGN1P05114 100 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 TSPAN19P0C672 248 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 IFI30P13284 250 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 APEHP13798 732 aaKnown RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 POU2F1P14859 743 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 BMP7P18075 431 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FUT4P22083 530 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 CRHBPP24387 322 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 MST1P26927 711 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ITPKBP27987 946 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ELK4P28324 431 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 TTKP33981 857 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 GRK5P34947 590 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 POLR2IP36954 125 aaKnown RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 PTGDSP41222 190 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 CCR4P51679 360 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ZNF41P51814 821 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 RPS4XP62701 263 aaKnown RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 EFNB1P98172 346 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 IL5RAQ01344 420 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 IL1RL1Q01638 556 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 Q0VFX4 171 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ATP1A4Q13733 1029 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 OCLNQ16625 522 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 COL28A1Q2UY09 1125 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 TBC1D25Q3MII6 688 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SLC22A10Q63ZE4 541 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ANKRD34AQ69YU3 496 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SMARCD3Q6STE5 483 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 P3H2Q8IVL5 708 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ENTHD1Q8IYW4 607 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 CYP4Z2PQ8N1L4 340 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ZNF786Q8N393 782 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FAM26EQ8N5C1 309 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 TMEM156Q8N614 296 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 TSPAN14Q8NG11 270 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 OR2T33Q8NG76 320 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 OR10G3Q8NGC4 313 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FAM81AQ8TBF8 368 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FANK1Q8TC84 345 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 DUSP19Q8WTR2 217 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 THAP3Q8WTV1 239 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SLC25A43Q8WUT9 341 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 RNF31Q96EP0 1072 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SGTBQ96EQ0 304 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FAM46AQ96IP4 442 aaKnown RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SLC38A2Q96QD8 506 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 GPX7Q96SL4 187 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 PRR14Q9BWN1 585 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FN3KQ9H479 309 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 CDCP1Q9H5V8 836 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 FKRPQ9H9S5 495 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 MEPEQ9NQ76 525 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SCN3BQ9NY72 215 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 CNOT2Q9NZN8 540 aaKnown RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 PPP4R1LQ9P1A2 415 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 ZNF229Q9UJW7 825 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SIGLEC7Q9Y286 467 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 NTNG1Q9Y2I2 539 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SLC6A5Q9Y345 797 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 MRPS18CQ9Y3D5 142 aaKnown RBP8.26□□□□□ -1.09
NR1I3-209ENST00000428574 PCDHGB1Q9Y5G3 927 aa8.26□□□□□ -1.09
NR1I3-209ENST00000428574 SCN2AQ99250 2005 aa8.25□□□□□ -1.09
NR1I3-209ENST00000428574 CCDC88CQ9P219 2028 aa8.25□□□□□ -1.09
NR1I3-209ENST00000428574 ZNF292O60281 2723 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms