RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 IGKV3D-15A0A087WSY6 115 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 A0A087WUV0 522 aaPredicted RBP12.83□□□□□ -0.36
PDAP1-202ENST00000426447 EXOC1LA0A1B0GW35 172 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 ATP6V1G2-DDX39BF2Z307 99 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 UROSP10746 265 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 DDX5P17844 614 aaKnown RBP12.83□□□□□ -0.36
PDAP1-202ENST00000426447 FOXG1P55316 489 aaPredicted RBP12.83□□□□□ -0.36
PDAP1-202ENST00000426447 SWI5Q1ZZU3 235 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 SPDYE7PQ495Y7 208 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 SYT14P1Q58G82 188 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 EXOSC6Q5RKV6 272 aaKnown RBP12.83□□□□□ -0.36
PDAP1-202ENST00000426447 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 R3HCC1LQ7Z5L2 792 aaKnown RBP12.83□□□□□ -0.36
PDAP1-202ENST00000426447 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.83□□□□□ -0.36
PDAP1-202ENST00000426447 ANKS4BQ8N8V4 417 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 WDR31Q8NA23 367 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 OR52E4Q8NGH9 312 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 CCT7Q99832 543 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 BHLHE41Q9C0J9 482 aaPredicted RBP12.83□□□□□ -0.36
PDAP1-202ENST00000426447 BPESC1Q9GZL8 116 aa12.83□□□□□ -0.36
PDAP1-202ENST00000426447 LRP5LA4QPB2 252 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 ITGA5P08648 1049 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 KRT16P08779 473 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 MYL2P10916 166 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SDC1P18827 310 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 CCT3P49368 545 aaKnown RBP12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SESN3P58005 492 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 PRPS1P60891 318 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 NAA20P61599 178 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 TGFBR3Q03167 851 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 TP53BP2Q13625 1128 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 ABLIM2Q6H8Q1 611 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 KLHL24Q6TFL4 600 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SPATA19Q7Z5L4 167 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 PIGXQ8TBF5 258 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SLC25A43Q8WUT9 341 aaPredicted RBP12.82□□□□□ -0.36
PDAP1-202ENST00000426447 IFT81Q8WYA0 676 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 ST8SIA1Q92185 356 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 MTERF3Q96E29 417 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 DNAJA3Q96EY1 480 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 KCNS3Q9BQ31 491 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SOX7Q9BT81 388 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SLC17A5Q9NRA2 495 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 PARPBPQ9NWS1 579 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 MALT1Q9UDY8 824 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 METRNQ9UJH8 293 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 CCL27Q9Y4X3 112 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SPIN1Q9Y657 262 aaPredicted RBP12.82□□□□□ -0.36
PDAP1-202ENST00000426447 KCNE3Q9Y6H6 103 aa12.82□□□□□ -0.36
PDAP1-202ENST00000426447 SERINC4A6NH21 518 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 ZNF716A6NP11 495 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 ESPNB1AK53 854 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 NPIPB8E9PQR5 432 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 ETV2O00321 342 aaPredicted RBP12.81□□□□□ -0.36
PDAP1-202ENST00000426447 WNT11O96014 354 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 PGCP20142 388 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 PRPH2P23942 346 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 NTF4P34130 210 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 SERPINF1P36955 418 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 MAGEA8P43361 318 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 ASMTP46597 345 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 PDE7AQ13946 482 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 GPR68Q15743 365 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 RFTN2Q52LD8 501 aaPredicted RBP12.81□□□□□ -0.36
PDAP1-202ENST00000426447 PDZK1Q5T2W1 519 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 CLEC6AQ6EIG7 209 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 CASP12Q6UXS9 341 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 CCDC103Q8IW40 242 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 C17orf78Q8N4C9 275 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 OR56A1Q8NGH5 318 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 LAT2Q9GZY6 243 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 SIRT3Q9NTG7 399 aaPredicted RBP12.81□□□□□ -0.36
PDAP1-202ENST00000426447 DCDC2Q9UHG0 476 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 FIS1Q9Y3D6 152 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 PTGDR2Q9Y5Y4 395 aa12.81□□□□□ -0.36
PDAP1-202ENST00000426447 MALRD1Q5VYJ5 2156 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 NPIPB9F8W1W9 429 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 SNUPNO95149 360 aaKnown RBP12.8□□□□□ -0.36
PDAP1-202ENST00000426447 CSTAP01040 98 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 CDH2P19022 906 aaPredicted RBP12.8□□□□□ -0.36
PDAP1-202ENST00000426447 APEX1P27695 318 aaKnown RBP12.8□□□□□ -0.36
PDAP1-202ENST00000426447 APOBEC1P41238 236 aaKnown RBP12.8□□□□□ -0.36
PDAP1-202ENST00000426447 CHN2P52757 468 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 OR2B6P58173 313 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 RPL38P63173 70 aaKnown RBP12.8□□□□□ -0.36
PDAP1-202ENST00000426447 GALNTL6Q49A17 601 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 FRMD7Q6ZUT3 714 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 C3orf56Q8N813 242 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 LINC01356Q8N9X3 169 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 C1orf162Q8NEQ5 155 aaPredicted RBP12.8□□□□□ -0.36
PDAP1-202ENST00000426447 ZNF563Q8TA94 476 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 FMO2Q99518 471 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 RAB1BQ9H0U4 201 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 TNFRSF12AQ9NP84 129 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 ACER3Q9NUN7 267 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 DCTN4Q9UJW0 460 aa12.8□□□□□ -0.36
PDAP1-202ENST00000426447 B9A039 149 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 G3V2L1 256 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 KLF11O14901 512 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms