RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 C3orf33Q6P1S2 294 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 C6orf120Q7Z4R8 191 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 DDIASQ8IXT1 998 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 CLEC4FQ8N1N0 589 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 OR5AK3PQ8NH89 298 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 RFWD2Q8NHY2 731 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 MOAP1Q96BY2 351 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 ZG16BQ96DA0 208 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 MUCL1Q96DR8 90 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 ARL5BQ96KC2 179 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 HS6ST2Q96MM7 605 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 TNFRSF13CQ96RJ3 184 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 MECRQ9BV79 373 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 CCDC106Q9BWC9 280 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 ZNF350Q9GZX5 532 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 CBLN4Q9NTU7 201 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 ACER3Q9NUN7 267 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 ZDHHC2Q9UIJ5 367 aa13.18□□□□□ -0.3
ATG4B-209ENST00000425239 FAF1Q9UNN5 650 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-209ENST00000425239 NBEAL1Q6ZS30 2694 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 PRAMEF27A3QJZ7 478 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
ATG4B-209ENST00000425239 IFNA2P01563 188 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 IGHV3-9P01782 118 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 GUSBP08236 651 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 KRT16P08779 473 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 PRPS1L1P21108 318 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 CD40P25942 277 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 VLDLRP98155 873 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 GABRA6Q16445 453 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 CHRFAM7AQ494W8 412 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 SYT14P1Q58G82 188 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 HOMEZQ8IX15 550 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 EIF1ADQ8N9N8 165 aaKnown RBP13.17□□□□□ -0.3
ATG4B-209ENST00000425239 WDR31Q8NA23 367 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 DHRS9Q9BPW9 319 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 RHNO1Q9BSD3 238 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 C1orf50Q9BV19 199 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 DUSP26Q9BV47 211 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 CACNG6Q9BXT2 260 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 SAP130Q9H0E3 1048 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 ALG2Q9H553 416 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 FAIMQ9NVQ4 179 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 TMEM160Q9NX00 188 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 SLC17A7Q9P2U7 560 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 MKLN1Q9UL63 735 aa13.17□□□□□ -0.3
ATG4B-209ENST00000425239 SULT2B1O00204 365 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 ITGA5P08648 1049 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 G6PDP11413 515 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 DDX5P17844 614 aaKnown RBP13.16□□□□□ -0.3
ATG4B-209ENST00000425239 MATN1P21941 496 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 PTAFRP25105 342 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 MAPK1P28482 360 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 SLC16A1P53985 500 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 PHC1P78364 1004 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 FUT5Q11128 374 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 GPR68Q15743 365 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 ZCCHC23Q6ZST2 131 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 CLECL1Q8IZS7 167 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 ZNF614Q8N883 585 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 OR52N5Q8NH56 324 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 HTRA1Q92743 480 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 AMBRA1Q9C0C7 1298 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 ATAD3AQ9NVI7 634 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 MALT1Q9UDY8 824 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 MID2Q9UJV3 735 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
ATG4B-209ENST00000425239 HEATR1Q9H583 2144 aaKnown RBP13.16□□□□□ -0.3
ATG4B-209ENST00000425239 ARFGEF3Q5TH69 2177 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 A0A1W2PR80 420 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 DUXAA6NLW8 204 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 H7C417 338 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-209ENST00000425239 STX11O75558 287 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 RAD51DO75771 328 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 PMS2P2O95744 297 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 CSTAP01040 98 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 C1QCP02747 245 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 UBTFL6P0CB48 400 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-209ENST00000425239 APOBEC1P41238 236 aaKnown RBP13.15□□□□□ -0.3
ATG4B-209ENST00000425239 CLDN8P56748 225 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 DSCR9P59020 149 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 CSNK2A1P68400 391 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-209ENST00000425239 MERTKQ12866 999 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 SPDYE7PQ495Y7 208 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 ATP6AP1LQ52LC2 224 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 TYW3Q6IPR3 259 aaKnown RBP13.15□□□□□ -0.3
ATG4B-209ENST00000425239 TMEM108Q6UXF1 575 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 CCDC103Q8IW40 242 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-209ENST00000425239 MUC15Q8N387 334 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 OR2W6PQ8NHA6 318 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms