RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SRP14P37108 136 aaKnown RBP14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 RNF144AP50876 292 aaPredicted RBP14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 SLC16A1P53985 500 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 SNRPD2P62316 118 aaKnown RBP14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 LASP1Q14847 261 aaKnown RBP14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 CDC73Q6P1J9 531 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 ST8SIA1Q92185 356 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 FCRL1Q96LA6 429 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 CDC42EP4Q9H3Q1 356 aaKnown RBP14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 SERINC1Q9NRX5 453 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 SIRT3Q9NTG7 399 aaPredicted RBP14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 ZCCHC3Q9NUD5 404 aaKnown RBP14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 MGAM2Q2M2H8 2515 aa14.62□□□□□ -0.07
CHCHD3-202ENST00000423635 LRP5LA4QPB2 252 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 ATP6V1G2-DDX39BF2Z307 99 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 VENTXO95231 258 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 STAMBPO95630 424 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 TACSTD2P09758 323 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 GIFP27352 417 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 SLC25A3Q00325 362 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 SLC7A5Q01650 507 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 CARTPTQ16568 116 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 SYT14P1Q58G82 188 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 DCST2Q5T1A1 773 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 DEF8Q6ZN54 512 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 ANKS4BQ8N8V4 417 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 LINC01356Q8N9X3 169 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 OR52E4Q8NGH9 312 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 RFWD2Q8NHY2 731 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 SLC25A43Q8WUT9 341 aaPredicted RBP14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 CCT7Q99832 543 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 QRSL1Q9H0R6 528 aaKnown RBP14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 C1orf109Q9NX04 203 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 METRNQ9UJH8 293 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 MOKQ9UQ07 419 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 KCNE3Q9Y6H6 103 aa14.61□□□□□ -0.07
CHCHD3-202ENST00000423635 B9A039 149 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 AKAP10O43572 662 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 LILRA1O75019 489 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 UBL4AP11441 157 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 SERPINF1P36955 418 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 CHN2P52757 468 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 SESN3P58005 492 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 NAA20P61599 178 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 SEMA6DQ8NFY4 1073 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 PIGXQ8TBF5 258 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 ADAMTS15Q8TE58 950 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 MTERF3Q96E29 417 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 CHMP6Q96FZ7 201 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 BOD1Q96IK1 185 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 VRK1Q99986 396 aaPredicted RBP14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 THUMPD3Q9BV44 507 aaKnown RBP14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 ACTRT3Q9BYD9 372 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 LAT2Q9GZY6 243 aa14.6□□□□□ -0.07
CHCHD3-202ENST00000423635 DNPH1O43598 174 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 URI1O94763 535 aaPredicted RBP14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 PMS2P2O95744 297 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 SDC1P18827 310 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 IL2RGP31785 369 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 PRPS1P60891 318 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 TGFBR3Q03167 851 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 UGT2A3Q6UWM9 527 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 CCNYL1Q8N7R7 359 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 TMEM234Q8WY98 164 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 CCDC126Q96EE4 140 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 ZHX1-C8orf76Q96EF9 292 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 TSSK3Q96PN8 268 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 TNFRSF12AQ9NP84 129 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 ACER3Q9NUN7 267 aa14.59□□□□□ -0.07
CHCHD3-202ENST00000423635 SERINC4A6NH21 518 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 SLC28A1O00337 649 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 PDE5AO76074 875 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 WNT11O96014 354 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 UROSP10746 265 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 FKBP2P26885 142 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 APOBEC1P41238 236 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 PPOXP50336 477 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 CCR4P51679 360 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 CDH15P55291 814 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 H3F3AP84243 136 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 MERTKQ12866 999 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 SKP2Q13309 424 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 EFNB3Q15768 340 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 ZNF572Q7Z3I7 529 aaPredicted RBP14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 SLC46A3Q7Z3Q1 461 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 CCDC103Q8IW40 242 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 TMCO5AQ8N6Q1 288 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 ZNF614Q8N883 585 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 PSMA8Q8TAA3 256 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 SDF2Q99470 211 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 NMUR2Q9GZQ4 415 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 RAB1BQ9H0U4 201 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 TSPYL1Q9H0U9 437 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 PLK3Q9H4B4 646 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 OCEL1Q9H607 264 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 SLC7A10Q9NS82 523 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 CA10Q9NS85 328 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 GPATCH2Q9NW75 528 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 PARPBPQ9NWS1 579 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 UPB1Q9UBR1 384 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms