RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 GPR137Q96N19 417 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF582Q96NG8 517 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PKMYT1Q99640 499 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TUBA1CQ9BQE3 449 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RPF2Q9H7B2 306 aaKnown RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PLGRKTQ9HBL7 147 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TMLHEQ9NVH6 421 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SAR1BQ9Y6B6 198 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ARID1AO14497 2285 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ADAM12O43184 909 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RAD51DO75771 328 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 IGHA2P01877 340 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RAC2P15153 192 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PROZP22891 400 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CXCR5P32302 372 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RFC3P40938 356 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SCTRP47872 440 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RAB9AP51151 201 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TMBIM6P55061 237 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CLDN15P56746 228 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 UBE2KP61086 200 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CLDN10P78369 228 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 FZD2Q14332 565 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SLBPQ14493 270 aaKnown RBP eCLIP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RIPPLY2Q5TAB7 128 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 LCN1P1Q5VSP4 162 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PRAMEF8Q5VWM4 474 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PRAMEF7Q5VXH5 474 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PCYOX1LQ8NBM8 494 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 COQ8BQ96D53 544 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SLC35G5Q96KT7 338 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CCDC115Q96NT0 180 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TRNT1Q96Q11 434 aaKnown RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ERGIC2Q96RQ1 377 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PCGF1Q9BSM1 259 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 C1QTNF6Q9BXI9 259 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SLC22A4Q9H015 551 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RNPEPL1Q9HAU8 725 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TMEM165Q9HC07 324 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ZFP64Q9NPA5 681 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 UFSP2Q9NUQ7 469 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF701Q9NV72 531 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ENPP5Q9UJA9 477 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RASD1Q9Y272 281 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CACNA1EQ15878 2313 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 EPG5Q9HCE0 2579 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 C12orf71A8MTZ7 269 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 B9A039 149 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 H0YIG0 161 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 MTX2O75431 263 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RGS11O94810 467 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ATG12O94817 140 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 FABP1P07148 127 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 GZMAP12544 262 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PGAM1P18669 254 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 S100A3P33764 101 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ATP1B3P54709 279 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PRRX1P54821 245 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CAV3P56539 151 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CLDN6P56747 220 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 KLF3P57682 345 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PJVKQ0ZLH3 352 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TSNQ15631 228 aaKnown RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CA9Q16790 459 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CPZQ66K79 652 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 THOC7Q6I9Y2 204 aaKnown RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CCDC144NLQ6NUI1 221 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 GPRIN1Q7Z2K8 1008 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PHC2Q8IXK0 858 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PGAM4Q8N0Y7 254 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TMEM185AQ8NFB2 350 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 BHLHE22Q8NFJ8 381 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 OR6Q1Q8NGQ2 317 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ADAMTS16Q8TE57 1224 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SLC25A43Q8WUT9 341 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CPNE4Q96A23 557 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 DUS3LQ96G46 650 aaKnown RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 MRPS26Q9BYN8 205 aaKnown RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PRDM7Q9NQW5 492 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TMEM216Q9P0N5 145 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CLN8Q9UBY8 286 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SLC23A1Q9UHI7 598 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 A0A1W2PRX2 142 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 FAM189A1O60320 539 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 FZD7O75084 574 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 STK16O75716 305 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 EML2O95834 649 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TGM4P49221 684 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 XKP51811 444 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 BMXP51813 675 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 CMC4P56277 68 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 DSC2Q02487 901 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RRN3P1Q2M238 152 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 GLYR1Q49A26 553 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SPANXN3Q5MJ09 141 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 FAM199XQ6PEV8 388 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 TUBA3EQ6PEY2 450 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ZBTB49Q6ZSB9 765 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ARMC8Q8IUR7 673 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SCUBE1Q8IWY4 988 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms