RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 RAB33AQ14088 237 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 UBE2NLQ5JXB2 153 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SHEQ5VZ18 495 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 FAM199XQ6PEV8 388 aaPredicted RBP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 TMUB2Q71RG4 321 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 DCUN1D3Q8IWE4 304 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 TEX19Q8NA77 164 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 OR56A1Q8NGH5 318 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SCARB1Q8WTV0 552 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 THEM6Q8WUY1 208 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SLC25A38Q96DW6 304 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 CD180Q99467 661 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 PDCD1LG2Q9BQ51 273 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 ARL6Q9H0F7 186 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SLC25A18Q9H1K4 315 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 FN3KQ9H479 309 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF275Q9NSD4 429 aaPredicted RBP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SLC22A31A6NKX4 558 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 KHDRBS3O75525 346 aaKnown RBP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 RP2O75695 350 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 AIFM1O95831 613 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 GKN3PP0CG01 181 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 IFNGR1P15260 489 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 GDI2P50395 445 aaKnown RBP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 TAS2R43P59537 309 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 UBE2MP61081 183 aaKnown RBP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 RPS11P62280 158 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 CRMP1Q14194 572 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SDR16C5Q8N3Y7 309 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 LNX2Q8N448 690 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF454Q8N9F8 522 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 OR5M1Q8NGP8 315 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SFXN5Q8TD22 340 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 SLC35A4Q96G79 324 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 HS6ST2Q96MM7 605 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 GFI1Q99684 422 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF416Q9BWM5 594 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 ZCCHC4Q9H5U6 513 aa15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 EXOSC3Q9NQT5 275 aaKnown RBP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF443Q9Y2A4 671 aaPredicted RBP15.42■□□□□ 0.06
NPC1L1-203ENST00000423141 TRAV27A0A087WT01 109 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 IGKV1-8A0A0C4DH67 115 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 CXorf51AA0A1B0GTR3 108 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 AIPO00170 330 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 KDM4BO94953 1096 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 PCDH8O95206 1070 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 CBX7O95931 251 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 BMP7P18075 431 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 MAT2AP31153 395 aaKnown RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ARHGDIBP52566 201 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 RAP2BP61225 183 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ERVK-21P61565 698 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 RPS15P62841 145 aaKnown RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 CSNK1G2P78368 415 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 PUS10Q3MIT2 529 aaKnown RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF836Q6ZNA1 936 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 FRRS1Q6ZNA5 592 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 SLC16A11Q8NCK7 471 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 MENTQ9BUN1 341 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 CMC2Q9NRP2 79 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 INPP5EQ9NRR6 644 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ADAM29Q9UKF5 820 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 FXYD6-FXYD2A0A087WZ82 144 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 HOXA2O43364 376 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ERI3O43414 337 aaKnown RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 CREBL2O60519 120 aaPredicted RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 STX11O75558 287 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 OR2A4O95047 310 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 GABRA1P14867 456 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 HOXD10P28358 340 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF136P52737 540 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 H2BFSP57053 126 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ERVFC1P60507 584 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 PRR5P85299 388 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 SLC9A5Q14940 896 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 SPOUT1Q5T280 376 aaKnown RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 PRAMEF8Q5VWM4 474 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 PRAMEF7Q5VXH5 474 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF626Q68DY1 528 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 HEPHL1Q6MZM0 1159 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 LINC01555Q8NAE3 123 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 SCLYQ96I15 445 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 OR2A7Q96R45 310 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 SEMA4CQ9C0C4 833 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 FXYD6Q9H0Q3 95 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 CLDND1Q9NY35 253 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 WSB2Q9NYS7 404 aaPredicted RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 GLS2Q9UI32 602 aa15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 ZNF223Q9UK11 482 aaPredicted RBP15.41■□□□□ 0.06
NPC1L1-203ENST00000423141 FAM74A7A6NL05 159 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 DNASE2O00115 360 aaPredicted RBP15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 EMC8O43402 210 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 IGF2P01344 180 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 CLTBP09497 229 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 UCHL1P09936 223 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 CPN1P15169 458 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 HTR2AP28223 471 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 FAM74A3Q4VXF1 159 aa15.4■□□□□ 0.06
NPC1L1-203ENST00000423141 ELFN2Q5R3F8 820 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms