RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 H1FNTQ75WM6 255 aaPredicted RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 RCOR2Q8IZ40 523 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 RDH11Q8TC12 318 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 C10orf105Q8TEF2 133 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF721Q8TF20 911 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 MRPL24Q96A35 216 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 H2AFJQ9BTM1 129 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 SF3B5Q9BWJ5 86 aaKnown RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 P2RY12Q9H244 342 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 METTL17Q9H7H0 456 aaPredicted RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 METTL7AQ9H8H3 244 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 ACTR8Q9H981 624 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 COPS7BQ9H9Q2 264 aaPredicted RBP4.29□□□□□ -1.72
SFXN1-202ENST00000421887 TAS2R10Q9NYW0 307 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 FETUBQ9UGM5 382 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 SLC2A6Q9UGQ3 507 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 RIMKLBQ9ULI2 386 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 MAD1L1Q9Y6D9 718 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 SPACA6W5XKT8 324 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 EXPH5Q8NEV8 1989 aa4.29□□□□□ -1.72
SFXN1-202ENST00000421887 hCG_1818297A0A087WSY0 165 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 A0A0G2JN53 185 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 GOLGA6L9A6NEM1 432 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ERI2A8K979 691 aaKnown RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 BTNL10A8MVZ5 291 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 NDUFS8O00217 210 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ERI3O43414 337 aaKnown RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 LDB3O75112 727 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CBR3O75828 277 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ETHE1O95571 254 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SERPINA6P08185 405 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 TMEM225BP0DP42 221 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 FCGR2AP12318 317 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ENO3P13929 434 aaPredicted RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF708P17019 499 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PTNP21246 168 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PSMA4P25789 261 aaKnown RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 GALNSP34059 522 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SKIV2L2P42285 1042 aaKnown RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CASP3P42574 277 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PCP4P48539 62 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CTBP2P56545 445 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 FBXW4P57775 412 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 TIRAPP58753 221 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 UBE2HP62256 183 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 IRX1P78414 480 aaPredicted RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 MYL5Q02045 173 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CFHR3Q02985 330 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 LGALS3BPQ08380 585 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 NAE1Q13564 534 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 KPNB1Q14974 876 aaKnown RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CARTPTQ16568 116 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SGCBQ16585 318 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CTSL3PQ5NE16 218 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 TIGD3Q6B0B8 471 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CCDC144NLQ6NUI1 221 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 TRIM40Q6P9F5 258 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 AGTRAPQ6RW13 159 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SBSNQ6UWP8 590 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 STAC2Q6ZMT1 411 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF534Q76KX8 674 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 C9orf40Q8IXQ3 194 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 UBQLNLQ8IYU4 475 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PRELID2Q8N945 189 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ZNF540Q8NDQ6 660 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 STEAP2Q8NFT2 490 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 KBTBD8Q8NFY9 601 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 OR52K1Q8NGK4 314 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 LILRB1Q8NHL6 650 aaPredicted RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 NFKBIDQ8NI38 313 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ACTL9Q8TC94 416 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SPPL2AQ8TCT8 520 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PEX13Q92968 403 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CTHRC1Q96CG8 243 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SNF8Q96H20 258 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SENP5Q96HI0 755 aaPredicted RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 SFXN2Q96NB2 322 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 DGAT2Q96PD7 388 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 AIF1LQ9BQI0 150 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 HEMGNQ9BXL5 484 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PINK1Q9BXM7 581 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 HDHD5Q9BXW7 423 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PRRG4Q9BZD6 226 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 STMN4Q9H169 189 aaPredicted RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 OR10A4Q9H209 315 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 CBLN4Q9NTU7 201 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 MED29Q9NX70 200 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 ARL15Q9NXU5 204 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 KLRF1Q9NZS2 232 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 MARCH4Q9P2E8 410 aaPredicted RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 POU2F3Q9UKI9 436 aa4.28□□□□□ -1.72
SFXN1-202ENST00000421887 WBP11Q9Y2W2 641 aaKnown RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 UBE2J1Q9Y385 318 aaPredicted RBP4.28□□□□□ -1.72
SFXN1-202ENST00000421887 PRR14LQ5THK1 2151 aa4.27□□□□□ -1.73
SFXN1-202ENST00000421887 ANK3Q12955 4377 aaKnown RBP4.27□□□□□ -1.73
SFXN1-202ENST00000421887 C2orf92A0A1B0GVN3 265 aa4.27□□□□□ -1.73
SFXN1-202ENST00000421887 GXYLT2A0PJZ3 443 aa4.27□□□□□ -1.73
SFXN1-202ENST00000421887 AGAP5A6NIR3 686 aa4.27□□□□□ -1.73
SFXN1-202ENST00000421887 SMAD9O15198 467 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms